Os02g0633100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0633100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20.01 | 0.21 | 10.3 | 1.3 | 0.442 | 0.27 | -0.1 | 1.23 | 0.128 | 16 | 20.5 | 1776 | -- | -- |
| 22.8 | 0.222 | 10.4 | 1.06 | 0.435 | 0.151 | -0.136 | -- | 0.0647 | 15.8 | 24.8 | 2119 | -- | -- |
| 20.03 | 0.208 | 10.3 | 1.3 | 0.441 | 0.268 | -- | 1.22 | 0.127 | 16 | 20.51 | 1735 | -- | -- |
| 22.78 | 0.222 | 10.4 | 1.07 | 0.445 | 0.128 | -- | -- | 0.0636 | 15.9 | 24.8 | 2102 | -- | -- |
| 30.68 | 0.258 | 10.3 | 1.28 | -- | 0.278 | -- | 1.26 | 0.117 | -- | 20.6 | 1770 | -- | -- |
| 23.21 | 0.226 | 10.4 | 1.12 | 0.447 | -- | -0.0624 | -- | 0.104 | 16 | -- | -- | -- | -- |
| 23.23 | 0.226 | 10.4 | 1.12 | 0.447 | -- | -- | -- | 0.104 | 16.1 | -- | -- | -- | -- |
| 28.66 | 0.25 | 10.4 | 1.05 | -- | 0.229 | -- | -- | 0.0246 | -- | 25.9 | 1835 | -- | -- |
| 29.42 | 0.253 | 10.5 | -- | 0.456 | 0.769 | -- | -- | -0.272 | 15.9 | 21.1 | 47520 | -- | -- |
| 34.1 | 0.273 | 10.4 | 1.1 | -- | -- | -- | -- | 0.0918 | -- | -- | -- | -- | -- |
| 56.07 | 0.35 | 10.4 | -- | 0.425 | -- | -- | -- | -0.0206 | 16.1 | -- | -- | -- | -- |
| 40.8 | 0.297 | 10.5 | -- | -- | 0.745 | -- | -- | -0.274 | -- | 21.01 | 47520 | -- | -- |
| 65.91 | 0.379 | 10.4 | -- | -- | -- | -- | -- | -0.03 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.49 | temperature | 20 | 4320 | < th | dose independent | rect. | 17 | 6 |
| 2 | 19.51 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 4 |
| 10 | 19.56 | temperature | 20 | 4320 | > th | dose independent | rect. | 17 | 6 |
| 13 | 19.57 | temperature | 20 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 15 | 19.59 | temperature | 20 | 4320 | > th | dose independent | rect. | 19 | 4 |
| 16 | 19.60 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 19 | 19.60 | temperature | 20 | 4320 | > th | dose independent | rect. | 12 | 11 |
| 27 | 19.69 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 54 | 19.81 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 17 |
| 60 | 19.84 | temperature | 20 | 1440 | < th | dose independent | rect. | 6 | 17 |
| 62 | 19.84 | temperature | 25 | 1440 | < th | dose dependent | rect. | 8 | 14 |
| 105 | 19.92 | temperature | 25 | 1440 | < th | dose dependent | sin | 20 | NA |
| 106 | 19.92 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 4 |
| 125 | 19.94 | temperature | 20 | 1440 | > th | dose independent | sin | 22 | NA |
| 149 | 19.96 | temperature | 20 | 1440 | < th | dose independent | sin | 21 | NA |
| 163 | 19.97 | temperature | 20 | 1440 | > th | dose independent | sin | 18 | NA |
| 164 | 19.97 | temperature | 20 | 1440 | < th | dose independent | sin | 18 | NA |
| 389 | 20.09 | humidity | 90 | 1440 | > th | dose independent | rect. | 9 | 22 |
| 474 | 20.14 | humidity | 90 | 1440 | > th | dose independent | rect. | 18 | 22 |
| 523 | 20.16 | humidity | 90 | 1440 | > th | dose independent | rect. | 23 | 23 |
| 556 | 20.18 | humidity | 90 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 568 | 20.18 | humidity | 90 | 1440 | > th | dose dependent | rect. | 8 | 22 |
| 588 | 20.20 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 590 | 20.20 | humidity | 90 | 1440 | > th | dose independent | no | NA | NA |
| 600 | 20.20 | temperature | 20 | 1440 | > th | dose independent | rect. | 16 | 22 |
| 601 | 20.20 | temperature | 20 | 1440 | > th | dose independent | rect. | 10 | 23 |
| 609 | 20.20 | humidity | 90 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 612 | 20.20 | temperature | 25 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 619 | 20.21 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 627 | 20.21 | temperature | 20 | 1440 | > th | dose independent | rect. | 12 | 21 |
| 635 | 20.21 | temperature | 20 | 1440 | < th | dose independent | rect. | 16 | 22 |
| 640 | 20.21 | temperature | 20 | 1440 | < th | dose independent | rect. | 10 | 23 |
| 651 | 20.21 | humidity | 90 | 1440 | > th | dose dependent | rect. | 4 | 22 |
| 675 | 20.22 | temperature | 20 | 1440 | < th | dose independent | rect. | 12 | 21 |
| 766 | 20.24 | temperature | 25 | 1440 | < th | dose dependent | rect. | 10 | 4 |
| 777 | 20.24 | humidity | 90 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 808 | 20.25 | humidity | 90 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 833 | 20.26 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 834 | 20.26 | humidity | 90 | 1440 | > th | dose dependent | no | NA | NA |
| 847 | 20.26 | humidity | 90 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 881 | 20.27 | humidity | 90 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 903 | 20.28 | temperature | 25 | 1440 | < th | dose dependent | rect. | 8 | 7 |
| 910 | 20.28 | temperature | 25 | 1440 | < th | dose dependent | rect. | 12 | 23 |
| 911 | 20.28 | temperature | 25 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 943 | 20.29 | humidity | 90 | 1440 | > th | dose dependent | rect. | 13 | 17 |
| 957 | 20.29 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 23 |