Os02g0632100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Wall-associated kinase-like protein.
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Os02g0632100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Wall-associated kinase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.24 | 0.316 | 3.2 | 0.163 | 0.126 | -0.169 | 0.149 | -0.918 | -0.0647 | 9.09 | 70.63 | 5008 | -- | -- |
| 46.32 | 0.317 | 3.2 | 0.157 | 0.127 | -0.191 | 0.0501 | -- | -0.0609 | 8.74 | 71 | 4262 | -- | -- |
| 45.32 | 0.314 | 3.21 | 0.164 | 0.127 | -0.172 | -- | -0.88 | -0.0664 | 8.89 | 70.71 | 4991 | -- | -- |
| 46.15 | 0.316 | 3.21 | 0.115 | 0.105 | -0.261 | -- | -- | -0.0888 | 9.37 | 70 | 4331 | -- | -- |
| 46 | 0.316 | 3.21 | 0.171 | -- | -0.15 | -- | -0.89 | -0.0622 | -- | 70.99 | 5848 | -- | -- |
| 47.21 | 0.322 | 3.2 | 0.111 | 0.104 | -- | 0.0598 | -- | -0.0547 | 9.21 | -- | -- | -- | -- |
| 47.22 | 0.322 | 3.2 | 0.113 | 0.104 | -- | -- | -- | -0.0547 | 9.07 | -- | -- | -- | -- |
| 46.74 | 0.318 | 3.21 | 0.114 | -- | -0.267 | -- | -- | -0.0889 | -- | 70 | 4374 | -- | -- |
| 46.46 | 0.317 | 3.21 | -- | 0.102 | -0.262 | -- | -- | -0.102 | 9.12 | 70.02 | 4332 | -- | -- |
| 47.85 | 0.323 | 3.2 | 0.112 | -- | -- | -- | -- | -0.0541 | -- | -- | -- | -- | -- |
| 47.56 | 0.323 | 3.2 | -- | 0.104 | -- | -- | -- | -0.0673 | 8.99 | -- | -- | -- | -- |
| 47.05 | 0.319 | 3.21 | -- | -- | -0.27 | -- | -- | -0.102 | -- | 70.41 | 4377 | -- | -- |
| 48.18 | 0.324 | 3.21 | -- | -- | -- | -- | -- | -0.0666 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 44.30 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 2 | 44.32 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 4 |
| 4 | 44.37 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 5 | 44.42 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 10 | 44.62 | wind | 1 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 11 | 44.62 | radiation | 10 | 10 | > th | dose independent | rect. | 6 | 1 |
| 37 | 44.62 | radiation | 10 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 47 | 44.62 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 6 |
| 71 | 44.71 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 7 |
| 75 | 44.76 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 7 |
| 76 | 44.77 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 7 |
| 78 | 44.79 | humidity | 70 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 79 | 44.79 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 6 |
| 84 | 44.81 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 9 |
| 85 | 44.82 | wind | 1 | 14400 | > th | dose independent | rect. | 2 | 6 |
| 90 | 44.86 | humidity | 70 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 98 | 44.91 | humidity | 70 | 4320 | > th | dose independent | rect. | 8 | 5 |
| 99 | 44.91 | humidity | 90 | 4320 | < th | dose dependent | rect. | 12 | 1 |
| 104 | 44.92 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 9 |
| 105 | 44.92 | humidity | 80 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 107 | 44.93 | humidity | 70 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 108 | 44.93 | humidity | 70 | 4320 | > th | dose independent | rect. | 4 | 9 |
| 110 | 44.93 | humidity | 70 | 4320 | > th | dose independent | rect. | 1 | 12 |
| 111 | 44.93 | humidity | 70 | 4320 | > th | dose independent | rect. | 20 | 17 |
| 116 | 44.94 | wind | 1 | 14400 | > th | dose independent | rect. | 2 | 9 |
| 122 | 44.94 | humidity | 50 | 4320 | > th | dose dependent | rect. | 11 | 2 |
| 124 | 44.95 | humidity | 70 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 136 | 44.97 | humidity | 80 | 14400 | < th | dose dependent | rect. | 5 | 4 |
| 143 | 44.98 | humidity | 80 | 4320 | < th | dose independent | rect. | 4 | 7 |
| 148 | 44.99 | humidity | 70 | 4320 | < th | dose independent | rect. | 8 | 5 |
| 172 | 45.01 | humidity | 70 | 4320 | > th | dose independent | sin | 5 | NA |
| 278 | 45.07 | humidity | 90 | 4320 | < th | dose dependent | rect. | 3 | 11 |
| 279 | 45.08 | humidity | 70 | 4320 | < th | dose independent | sin | 5 | NA |
| 310 | 45.09 | atmosphere | 1000 | 90 | > th | dose independent | rect. | 3 | 23 |
| 312 | 45.09 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 2 | 2 |
| 333 | 45.10 | humidity | 90 | 4320 | < th | dose dependent | rect. | 23 | 15 |
| 405 | 45.12 | humidity | 50 | 4320 | > th | dose dependent | rect. | 3 | 11 |
| 520 | 45.15 | humidity | 90 | 4320 | < th | dose dependent | sin | 4 | NA |
| 782 | 45.22 | atmosphere | 995 | 10 | > th | dose independent | rect. | 3 | 23 |
| 784 | 45.22 | wind | 1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 820 | 45.23 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 850 | 45.24 | humidity | 50 | 4320 | > th | dose dependent | sin | 4 | NA |
| 899 | 45.26 | wind | 1 | 14400 | > th | dose independent | sin | 5 | NA |
| 916 | 45.26 | wind | 1 | 14400 | > th | dose independent | rect. | 21 | 11 |
| 925 | 45.26 | humidity | 60 | 4320 | < th | dose dependent | rect. | 14 | 1 |