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Os02g0631500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Initiation factor eIF-4 gamma, middle domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.9 (0.0159) R2 : 0.00379
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.044 (0.0334) R2dN8 : 0.00489 R2N8 : 0.00379
σ : 0.299
deviance : 41.08
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
11.88 0.162 11.8 1.43 0.306 -0.454 0.2 1.74 0.268 11.5 20.85 1743 -- --
14 0.174 11.9 1 0.312 -0.396 0.117 -- 0.166 10.7 16.23 7110 -- --
12.05 0.162 11.8 1.43 0.306 -0.452 -- 1.72 0.268 11.4 20.9 1710 -- --
13.87 0.173 11.9 1.08 0.299 -0.497 -- -- 0.196 11 12.69 9646 -- --
16.61 0.19 11.8 1.51 -- -0.557 -- 1.9 0.29 -- 21.69 2276 -- --
17.87 0.198 11.9 0.794 0.322 -- 0.179 -- 0.0462 11.2 -- -- -- --
18.01 0.199 11.9 0.801 0.322 -- -- -- 0.0467 11.1 -- -- -- --
19.39 0.205 11.9 1.1 -- -0.552 -- -- 0.219 -- 11.95 9576 -- --
26.2 0.238 12 -- 0.329 0.439 -- -- -0.202 11.2 19.9 47520 -- --
24.46 0.231 11.9 0.794 -- -- -- -- 0.044 -- -- -- -- --
34.93 0.276 11.9 -- 0.314 -- -- -- -0.0425 11 -- -- -- --
32.95 0.267 12 -- -- 0.429 -- -- -0.192 -- 18.2 47520 -- --
41.08 0.299 11.9 -- -- -- -- -- -0.044 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 11.12 humidity 90 14400 > th dose dependent rect. 21 5
2 11.21 radiation 1 14400 < th dose independent rect. 18 12
3 11.23 radiation 1 14400 > th dose independent rect. 18 12
7 11.27 radiation 1 14400 > th dose independent rect. 18 1
23 11.39 radiation 1 14400 < th dose independent rect. 18 7
26 11.40 radiation 1 14400 < th dose independent rect. 18 1
41 11.49 humidity 90 14400 > th dose independent rect. 18 10
63 11.57 humidity 90 14400 > th dose dependent sin 13 NA
66 11.59 temperature 20 1440 > th dose dependent rect. 20 1
80 11.64 temperature 20 1440 > th dose dependent rect. 18 5
85 11.65 wind 9 43200 > th dose dependent rect. 19 2
112 11.70 humidity 90 14400 < th dose independent rect. 18 10
119 11.72 humidity 90 43200 < th dose independent rect. 22 1
120 11.72 humidity 90 14400 > th dose independent rect. 21 3
124 11.73 wind 9 43200 > th dose independent rect. 19 2
132 11.73 radiation 1 14400 < th dose dependent rect. 18 1
133 11.73 humidity 80 43200 > th dose dependent rect. 18 2
157 11.74 radiation 1 14400 < th dose dependent rect. 5 1
163 11.75 radiation 1 14400 > th dose independent rect. 5 1
164 11.75 temperature 20 1440 > th dose dependent sin 14 NA
172 11.76 radiation 1 14400 < th dose independent rect. 5 1
188 11.78 humidity 90 43200 > th dose independent rect. 22 1
202 11.79 humidity 90 43200 < th dose independent rect. 19 4
245 11.82 humidity 90 43200 < th dose independent rect. 19 2
263 11.84 humidity 90 43200 > th dose independent rect. 5 2
293 11.86 wind 9 43200 < th dose independent rect. 19 2
312 11.88 humidity 90 14400 > th dose independent sin 13 NA
313 11.88 atmosphere 995 43200 < th dose independent rect. 13 2
322 11.88 wind 9 43200 > th dose dependent rect. 18 7
341 11.90 wind 9 43200 > th dose dependent rect. 18 9
362 11.92 atmosphere 995 43200 < th dose dependent rect. 14 2
381 11.94 atmosphere 995 43200 > th dose independent rect. 12 3
386 11.94 humidity 90 43200 < th dose independent rect. 5 5
387 11.94 atmosphere 995 43200 < th dose independent rect. 10 6
398 11.95 atmosphere 995 43200 > th dose independent rect. 12 1
470 11.97 humidity 90 43200 < th dose independent rect. 5 20
485 11.98 wind 1 43200 > th dose dependent rect. 7 9
545 12.01 humidity 90 43200 > th dose dependent rect. 6 1
547 12.01 humidity 90 43200 > th dose dependent rect. 5 3
566 12.02 wind 7 43200 < th dose dependent rect. 7 9
656 12.06 wind 3 43200 > th dose dependent rect. 5 16
661 12.06 temperature 20 1440 > th dose dependent rect. 17 22
690 12.07 humidity 90 43200 > th dose independent rect. 5 20
770 12.10 wind 1 43200 > th dose dependent sin 0 NA
792 12.11 humidity 90 14400 < th dose independent sin 13 NA
804 12.11 temperature 20 1440 > th dose dependent no NA NA
815 12.11 humidity 80 43200 > th dose dependent rect. 5 18
852 12.12 temperature 20 1440 > th dose dependent rect. 1 23
855 12.13 humidity 80 43200 > th dose independent rect. 17 1
857 12.13 humidity 90 43200 < th dose independent rect. 9 1
896 12.13 temperature 20 1440 > th dose dependent rect. 20 23
915 12.14 wind 9 43200 < th dose dependent sin 0 NA
916 12.14 wind 5 43200 < th dose dependent rect. 11 2
926 12.14 humidity 90 43200 > th dose dependent rect. 4 9
951 12.15 humidity 90 43200 > th dose independent rect. 3 10
990 12.16 wind 5 43200 > th dose independent rect. 15 1
993 12.16 humidity 80 43200 < th dose independent rect. 12 8
998 12.16 wind 5 43200 < th dose independent rect. 5 14