Os02g0630600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os02g0630600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 321.23 | 0.842 | 9.64 | -0.518 | 6.45 | 3.43 | 1.67 | 2.86 | 0.209 | 17.7 | 25.7 | 104 | 3.21 | -- |
| 331.77 | 0.848 | 9.6 | -0.203 | 6.48 | 3.21 | 0.377 | -- | 0.294 | 17.7 | 25.8 | 86 | 2.77 | -- |
| 326.78 | 0.842 | 9.62 | -0.454 | 6.47 | 3.56 | -- | 2.39 | 0.26 | 17.7 | 25.7 | 131 | 3.63 | -- |
| 332.05 | 0.849 | 9.6 | -0.199 | 6.49 | 3.24 | -- | -- | 0.298 | 17.7 | 25.81 | 88 | 2.81 | -- |
| 2128.13 | 2.16 | 5560 | 11700 | -- | 1280000 | -- | 2700000 | -0.231 | -- | 14.5 | 3085 | 5.42 | -- |
| 452.73 | 0.998 | 9.73 | -0.703 | 5.68 | -- | 0.811 | -- | -0.266 | 18.2 | -- | -- | -- | -- |
| 454.35 | 0.998 | 9.73 | -0.711 | 5.69 | -- | -- | -- | -0.263 | 18.2 | -- | -- | -- | -- |
| 2046.94 | 2.12 | 9.56 | -0.541 | -- | 2.74 | -- | -- | -0.104 | -- | 23.96 | 23 | 8.08 | -- |
| 333.02 | 0.85 | 9.6 | -- | 6.52 | 3.3 | -- | -- | 0.332 | 17.7 | 25.84 | 89 | 2.79 | -- |
| 2132.54 | 2.16 | 9.63 | -0.87 | -- | -- | -- | -- | -0.389 | -- | -- | -- | -- | -- |
| 467.68 | 1.01 | 9.71 | -- | 5.7 | -- | -- | -- | -0.184 | 18.2 | -- | -- | -- | -- |
| 469.07 | 1.01 | 9.57 | -- | -- | 6.08 | -- | -- | -0.135 | -- | 146.4 | 4 | 11.9 | -- |
| 2152.49 | 2.17 | 9.6 | -- | -- | -- | -- | -- | -0.293 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 317.77 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 10 |
| 3 | 318.96 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 10 |
| 12 | 322.79 | temperature | 20 | 270 | > th | dose dependent | rect. | 19 | 10 |
| 21 | 325.32 | temperature | 25 | 90 | < th | dose dependent | sin | 9 | NA |
| 80 | 334.12 | temperature | 25 | 270 | < th | dose dependent | sin | 12 | NA |
| 104 | 335.82 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 4 |
| 157 | 339.59 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 1 |
| 177 | 340.99 | temperature | 15 | 90 | > th | dose dependent | sin | 8 | NA |
| 326 | 350.70 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 357 | 351.91 | temperature | 20 | 270 | < th | dose independent | rect. | 21 | 8 |
| 428 | 354.84 | temperature | 20 | 30 | > th | dose independent | rect. | 20 | 18 |
| 429 | 354.89 | temperature | 20 | 90 | < th | dose independent | rect. | 23 | 9 |
| 447 | 355.53 | temperature | 20 | 30 | > th | dose independent | rect. | 20 | 16 |
| 486 | 356.55 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 20 |
| 533 | 357.71 | temperature | 20 | 90 | > th | dose independent | rect. | 19 | 23 |
| 543 | 358.02 | temperature | 20 | 90 | < th | dose independent | sin | 9 | NA |
| 569 | 358.44 | temperature | 20 | 90 | > th | dose independent | sin | 8 | NA |
| 600 | 359.07 | temperature | 20 | 90 | > th | dose independent | rect. | 20 | 9 |
| 650 | 360.05 | temperature | 20 | 270 | < th | dose independent | sin | 12 | NA |
| 667 | 360.44 | temperature | 25 | 90 | < th | dose dependent | rect. | 21 | 22 |
| 670 | 360.50 | temperature | 20 | 90 | > th | dose independent | rect. | 17 | 23 |
| 839 | 363.38 | temperature | 20 | 270 | > th | dose independent | rect. | 18 | 10 |
| 846 | 363.47 | temperature | 25 | 270 | > th | dose independent | rect. | 19 | 12 |
| 867 | 363.74 | temperature | 25 | 720 | > th | dose independent | rect. | 20 | 3 |