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Os02g0629400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Phytosulfokine receptor precursor (EC 2.7.1.37) (Phytosulfokine LRR receptor kinase).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.55 (0.0292) R2 : 0.16
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.691 (0.0757) R2dC : 0.155 R2C : 0.153
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.103 (0.0615) R2dN8 : 0.00668 R2N8 : 0.00524
σ : 0.551
deviance : 138.72
__
_____
C
peak time of C : 19.3
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
115.38 0.505 7.47 0.285 0.722 0.41 0.511 -1.32 0.161 18.8 23.77 48 -- --
123.99 0.519 7.49 -0.185 0.727 0.411 0.753 -- 0.0954 18.4 24.19 53 -- --
115.84 0.501 7.46 0.298 0.735 0.43 -- -1.35 0.176 18.6 23.87 71 -- --
125.02 0.521 7.52 -0.171 0.714 0.401 -- -- 0.0462 18.6 24 43 -- --
143.43 0.558 7.45 0.23 -- 0.386 -- -1.29 0.143 -- 23.9 69 -- --
134.91 0.545 7.56 -0.321 0.688 -- 0.575 -- -0.141 19.2 -- -- -- --
135.77 0.546 7.56 -0.334 0.688 -- -- -- -0.14 19.4 -- -- -- --
151.97 0.574 7.51 -0.216 -- 0.331 -- -- -0.00993 -- 23.88 44 -- --
125.79 0.522 7.51 -- 0.742 0.416 -- -- 0.0695 18.6 24.1 43 -- --
160.95 0.593 7.54 -0.346 -- -- -- -- -0.152 -- -- -- -- --
138.72 0.551 7.55 -- 0.691 -- -- -- -0.103 19.3 -- -- -- --
153.02 0.576 7.5 -- -- 0.365 -- -- 0.0334 -- 23.88 44 -- --
164.1 0.598 7.53 -- -- -- -- -- -0.113 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 108.44 temperature 20.0 30 > th dose dependent rect. 17 19
38 114.95 radiation 1.0 720 < th dose dependent rect. 5 19
41 115.10 temperature 25.0 10 > th dose independent rect. 17 19
58 115.63 temperature 25.0 10 > th dose independent rect. 17 21
85 116.69 temperature 20.0 30 > th dose dependent sin 7 NA
91 116.86 radiation 20.0 14400 < th dose independent rect. 18 12
94 116.95 wind 3.0 43200 > th dose dependent rect. 16 2
104 117.14 wind 5.0 43200 > th dose independent rect. 16 3
106 117.17 wind 5.0 43200 < th dose independent rect. 16 3
113 117.22 humidity 50.0 43200 > th dose independent rect. 17 3
120 117.30 humidity 50.0 43200 < th dose independent rect. 17 3
122 117.31 wind 5.0 14400 < th dose independent rect. 11 1
129 117.39 radiation 1.0 720 < th dose independent rect. 6 18
133 117.45 wind 5.0 14400 > th dose independent rect. 11 1
140 117.51 temperature 20.0 10 > th dose dependent rect. 23 13
171 117.73 temperature 25.0 30 < th dose independent rect. 3 23
177 117.78 wind 3.0 14400 > th dose independent rect. 20 1
178 117.78 wind 3.0 14400 < th dose independent rect. 20 1
186 117.84 humidity 80.0 43200 > th dose independent rect. 19 4
192 117.88 humidity 90.0 90 < th dose independent rect. 17 19
202 117.95 humidity 60.0 43200 < th dose dependent rect. 18 1
211 118.01 wind 3.0 14400 > th dose dependent rect. 11 1
212 118.01 humidity 90.0 90 < th dose dependent rect. 17 19
215 118.03 humidity 80.0 1440 > th dose independent rect. 11 1
231 118.10 humidity 90.0 30 < th dose dependent rect. 17 21
232 118.11 humidity 80.0 43200 < th dose independent rect. 19 4
234 118.11 temperature 20.0 30 > th dose dependent rect. 13 23
235 118.13 wind 9.0 43200 < th dose dependent rect. 16 2
243 118.16 radiation 1.0 14400 < th dose dependent rect. 9 1
246 118.18 precipitation 0.1 43200 > th dose independent rect. 23 1
248 118.18 precipitation 0.1 43200 > th dose dependent rect. 23 1
255 118.22 radiation 1.0 720 < th dose dependent rect. 1 23
256 118.23 precipitation 0.1 43200 < th dose independent rect. 23 1
259 118.23 precipitation 0.1 43200 < th dose dependent rect. 23 1
268 118.27 atmosphere 1005.0 43200 < th dose independent rect. 10 2
287 118.34 humidity 60.0 43200 > th dose independent rect. 9 1
289 118.34 humidity 90.0 10 < th dose independent rect. 17 21
290 118.34 temperature 15.0 14400 < th dose dependent rect. 4 1
291 118.35 atmosphere 1005.0 43200 > th dose independent rect. 10 1
302 118.38 radiation 1.0 1440 < th dose dependent rect. 16 3
311 118.41 humidity 70.0 90 > th dose dependent rect. 21 20
313 118.42 radiation 1.0 1440 < th dose dependent rect. 16 11
316 118.43 radiation 1.0 1440 < th dose dependent rect. 16 9
323 118.45 humidity 50.0 43200 > th dose independent rect. 16 7
336 118.48 humidity 60.0 43200 < th dose independent rect. 9 1
352 118.51 humidity 90.0 720 > th dose dependent rect. 8 16
376 118.56 humidity 80.0 1440 < th dose independent rect. 11 1
377 118.57 humidity 60.0 43200 < th dose independent rect. 8 4
414 118.63 humidity 70.0 43200 < th dose dependent rect. 10 5
464 118.70 humidity 70.0 43200 < th dose dependent rect. 10 10
468 118.71 radiation 1.0 720 > th dose independent rect. 15 21
469 118.71 humidity 70.0 43200 < th dose dependent rect. 12 1
503 118.75 humidity 70.0 43200 < th dose independent rect. 1 21
504 118.75 humidity 80.0 43200 < th dose dependent rect. 10 1
532 118.77 humidity 70.0 43200 < th dose dependent rect. 4 15
534 118.77 humidity 70.0 43200 < th dose dependent rect. 2 17
537 118.77 radiation 1.0 720 < th dose dependent rect. 20 22
549 118.79 humidity 50.0 43200 < th dose independent rect. 14 1
551 118.79 humidity 70.0 43200 < th dose dependent sin 23 NA
587 118.82 humidity 70.0 43200 < th dose dependent rect. 4 12
614 118.84 humidity 60.0 43200 > th dose independent rect. 8 3
656 118.86 radiation 1.0 720 > th dose independent rect. 8 10
673 118.87 humidity 70.0 43200 < th dose independent rect. 12 23
695 118.88 humidity 70.0 43200 < th dose dependent rect. 10 17
698 118.88 humidity 70.0 43200 < th dose dependent rect. 10 19
719 118.90 humidity 50.0 43200 > th dose independent rect. 14 1
739 118.91 humidity 70.0 43200 < th dose independent rect. 1 16
750 118.92 humidity 70.0 43200 < th dose independent sin 4 NA
763 118.92 humidity 50.0 43200 < th dose dependent rect. 16 15
769 118.93 humidity 70.0 43200 < th dose independent rect. 14 21
774 118.93 humidity 70.0 43200 < th dose independent rect. 18 23
775 118.93 radiation 10.0 14400 > th dose dependent rect. 5 2
821 118.95 humidity 70.0 43200 < th dose independent rect. 7 23
836 118.96 humidity 70.0 43200 < th dose independent no NA NA
837 118.96 temperature 20.0 43200 > th dose independent rect. 6 1
844 118.96 humidity 70.0 43200 < th dose independent rect. 2 11
907 118.98 humidity 50.0 43200 < th dose dependent rect. 16 18
913 118.99 humidity 70.0 43200 < th dose independent rect. 14 9
915 118.99 wind 7.0 14400 < th dose independent rect. 10 11
940 119.00 temperature 20.0 43200 > th dose independent rect. 2 1
951 119.00 humidity 70.0 43200 < th dose dependent no NA NA
987 119.01 wind 7.0 14400 < th dose independent rect. 5 15