Os02g0628600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transcriptional factor B3 family protein.
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Os02g0628600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transcriptional factor B3 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 107.64 | 0.487 | 2.86 | 0.159 | 0.148 | 2.6 | -0.444 | 3.6 | 0.0918 | 6.46 | 9.1 | 27 | -- | -- |
| 108.46 | 0.485 | 2.86 | 0.237 | 0.197 | 2.58 | -0.343 | -- | 0.114 | 6.23 | 9.2 | 18 | -- | -- |
| 106.8 | 0.481 | 2.86 | 0.152 | 0.143 | 2.91 | -- | 3.91 | 0.0942 | 6.96 | 9.172 | 18 | -- | -- |
| 107.55 | 0.483 | 2.85 | 0.136 | 0.145 | 1.84 | -- | -- | 0.0968 | 7 | 9.164 | 18 | -- | -- |
| 107.87 | 0.484 | 2.87 | 0.155 | -- | 2.89 | -- | 3.96 | 0.0963 | -- | 9.165 | 18 | -- | -- |
| 114.87 | 0.502 | 2.86 | 0.0351 | 0.135 | -- | -0.168 | -- | 0.0578 | 8.21 | -- | -- | -- | -- |
| 114.94 | 0.502 | 2.86 | 0.0307 | 0.135 | -- | -- | -- | 0.0582 | 8.54 | -- | -- | -- | -- |
| 108.65 | 0.485 | 2.85 | 0.137 | -- | 1.81 | -- | -- | 0.1 | -- | 9.176 | 18 | -- | -- |
| 108.02 | 0.484 | 2.85 | -- | 0.145 | 1.75 | -- | -- | 0.0802 | 7.01 | 9.163 | 18 | -- | -- |
| 115.96 | 0.503 | 2.86 | 0.0312 | -- | -- | -- | -- | 0.0594 | -- | -- | -- | -- | -- |
| 114.97 | 0.502 | 2.86 | -- | 0.135 | -- | -- | -- | 0.0547 | 8.53 | -- | -- | -- | -- |
| 109.13 | 0.487 | 2.86 | -- | -- | 1.72 | -- | -- | 0.082 | -- | 9.171 | 18 | -- | -- |
| 115.99 | 0.503 | 2.86 | -- | -- | -- | -- | -- | 0.0559 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 101.57 | wind | 9.0 | 10 | > th | dose dependent | rect. | 11 | 1 |
| 3 | 101.72 | wind | 9.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 6 | 101.82 | wind | 9.0 | 90 | > th | dose dependent | rect. | 11 | 1 |
| 109 | 103.20 | wind | 9.0 | 10 | > th | dose dependent | sin | 7 | NA |
| 161 | 103.94 | wind | 9.0 | 30 | > th | dose independent | sin | 5 | NA |
| 162 | 103.95 | wind | 9.0 | 30 | < th | dose independent | sin | 6 | NA |
| 185 | 104.12 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 211 | 104.41 | wind | 5.0 | 10 | > th | dose independent | rect. | 11 | 1 |
| 623 | 106.83 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 631 | 106.87 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 717 | 107.14 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 803 | 107.37 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 806 | 107.39 | wind | 5.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 813 | 107.40 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 815 | 107.40 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 816 | 107.40 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 820 | 107.40 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 821 | 107.40 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 823 | 107.40 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 828 | 107.40 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 829 | 107.40 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 831 | 107.40 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 836 | 107.40 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 850 | 107.46 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 854 | 107.47 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 859 | 107.50 | wind | 9.0 | 30 | < th | dose dependent | rect. | 2 | 1 |