Os02g0625500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Adenosine kinase-like protein (Fragment).
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Os02g0625500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Adenosine kinase-like protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 99.2 | 0.468 | 12 | 0.314 | 0.379 | -0.641 | 0.19 | -1.83 | 0.264 | 23.4 | 20.42 | 1358 | -- | -- |
| 100.36 | 0.467 | 12 | 0.822 | 0.419 | -0.743 | 0.141 | -- | 0.377 | 23.5 | 23.1 | 1304 | -- | -- |
| 99.3 | 0.464 | 12 | 0.362 | 0.373 | -0.631 | -- | -1.6 | 0.274 | 23.6 | 21.06 | 1377 | -- | -- |
| 100.37 | 0.467 | 12 | 0.838 | 0.408 | -0.755 | -- | -- | 0.386 | 23.7 | 23.2 | 1304 | -- | -- |
| 107.12 | 0.482 | 12 | 0.348 | -- | -0.601 | -- | -1.63 | 0.272 | -- | 20.96 | 1517 | -- | -- |
| 120.33 | 0.514 | 12 | 0.587 | 0.324 | -- | 0.134 | -- | 0.242 | 22.7 | -- | -- | -- | -- |
| 120.39 | 0.514 | 12 | 0.581 | 0.323 | -- | -- | -- | 0.241 | 22.9 | -- | -- | -- | -- |
| 108.44 | 0.485 | 12 | 0.843 | -- | -0.692 | -- | -- | 0.392 | -- | 23.1 | 1510 | -- | -- |
| 117.3 | 0.504 | 12 | -- | 0.391 | -0.559 | -- | -- | 0.254 | 23.6 | 23.6 | 1300 | -- | -- |
| 126.88 | 0.526 | 12 | 0.588 | -- | -- | -- | -- | 0.243 | -- | -- | -- | -- | -- |
| 129.27 | 0.532 | 12 | -- | 0.328 | -- | -- | -- | 0.176 | 23.1 | -- | -- | -- | -- |
| 125.54 | 0.522 | 12 | -- | -- | -0.497 | -- | -- | 0.26 | -- | 23.5 | 1510 | -- | -- |
| 135.98 | 0.544 | 12 | -- | -- | -- | -- | -- | 0.178 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 95.98 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 11 | 96.58 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 73 | 97.70 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 126 | 98.17 | temperature | 20 | 1440 | > th | dose dependent | sin | 17 | NA |
| 194 | 98.49 | temperature | 10 | 1440 | > th | dose dependent | sin | 18 | NA |
| 325 | 99.01 | temperature | 25 | 1440 | < th | dose independent | rect. | 17 | 6 |
| 330 | 99.04 | temperature | 25 | 1440 | > th | dose independent | rect. | 17 | 6 |
| 400 | 99.22 | temperature | 25 | 1440 | < th | dose independent | rect. | 19 | 2 |
| 487 | 99.41 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 496 | 99.42 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 23 |
| 497 | 99.43 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 522 | 99.46 | wind | 9 | 4320 | < th | dose independent | rect. | 18 | 3 |
| 610 | 99.61 | temperature | 25 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 664 | 99.71 | wind | 7 | 4320 | > th | dose independent | rect. | 17 | 8 |
| 672 | 99.72 | wind | 7 | 4320 | > th | dose independent | rect. | 17 | 4 |
| 751 | 99.87 | wind | 7 | 4320 | < th | dose independent | rect. | 17 | 8 |
| 752 | 99.87 | temperature | 30 | 1440 | < th | dose dependent | sin | 18 | NA |
| 887 | 100.11 | temperature | 25 | 1440 | > th | dose independent | sin | 16 | NA |
| 922 | 100.17 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 977 | 100.25 | wind | 7 | 4320 | > th | dose dependent | rect. | 17 | 4 |
| 996 | 100.29 | wind | 7 | 4320 | > th | dose dependent | rect. | 17 | 8 |