Os02g0623600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0623600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein kinase-like domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 328.87 | 0.852 | 3.62 | -0.259 | 0.667 | -0.79 | -0.272 | -0.0136 | -0.051 | 0.32 | 19.97 | 12 | -- | -- |
| 328.87 | 0.845 | 3.62 | -0.262 | 0.666 | -0.789 | -0.277 | -- | -0.0515 | 0.32 | 19.97 | 12 | -- | -- |
| 329.13 | 0.845 | 3.62 | -0.233 | 0.669 | -0.795 | -- | -0.108 | -0.0462 | 0.225 | 19.97 | 12 | -- | -- |
| 329.19 | 0.845 | 3.62 | -0.25 | 0.667 | -0.789 | -- | -- | -0.0498 | 0.215 | 19.95 | 12 | -- | -- |
| 355.14 | 0.878 | 3.6 | -0.175 | -- | -0.568 | -- | 0.00114 | -0.00333 | -- | 19.98 | 14 | -- | -- |
| 353.19 | 0.881 | 3.59 | -0.0642 | 0.492 | -- | -0.269 | -- | 0.0889 | 0.0982 | -- | -- | -- | -- |
| 353.45 | 0.88 | 3.59 | -0.0526 | 0.494 | -- | -- | -- | 0.0909 | 23.9 | -- | -- | -- | -- |
| 355.14 | 0.878 | 3.6 | -0.176 | -- | -0.571 | -- | -- | -0.00118 | -- | 19.96 | 14 | -- | -- |
| 330.77 | 0.847 | 3.61 | -- | 0.655 | -0.748 | -- | -- | -0.0159 | 0.181 | 20 | 11 | -- | -- |
| 368.8 | 0.897 | 3.58 | -0.0379 | -- | -- | -- | -- | 0.0973 | -- | -- | -- | -- | -- |
| 353.52 | 0.88 | 3.59 | -- | 0.493 | -- | -- | -- | 0.0967 | 23.9 | -- | -- | -- | -- |
| 355.93 | 0.879 | 3.59 | -- | -- | -0.543 | -- | -- | 0.0219 | -- | 19.96 | 11 | -- | -- |
| 368.83 | 0.896 | 3.58 | -- | -- | -- | -- | -- | 0.102 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 323.79 | temperature | 20 | 10 | > th | dose independent | sin | 11 | NA |
| 2 | 324.00 | temperature | 20 | 270 | > th | dose independent | rect. | 15 | 10 |
| 6 | 324.59 | temperature | 20 | 30 | > th | dose independent | sin | 14 | NA |
| 13 | 324.88 | temperature | 20 | 90 | > th | dose independent | rect. | 17 | 9 |
| 15 | 325.00 | temperature | 20 | 270 | > th | dose independent | rect. | 4 | 21 |
| 18 | 325.09 | temperature | 20 | 10 | > th | dose independent | rect. | 6 | 20 |
| 23 | 325.33 | temperature | 20 | 10 | < th | dose independent | sin | 12 | NA |
| 26 | 325.43 | temperature | 20 | 90 | > th | dose independent | rect. | 5 | 23 |
| 29 | 325.60 | temperature | 20 | 10 | < th | dose independent | rect. | 16 | 13 |
| 30 | 325.61 | temperature | 20 | 10 | > th | dose independent | rect. | 6 | 23 |
| 54 | 326.26 | temperature | 20 | 10 | < th | dose independent | rect. | 16 | 17 |
| 125 | 327.37 | temperature | 20 | 10 | < th | dose independent | rect. | 12 | 17 |
| 135 | 327.54 | temperature | 20 | 90 | < th | dose independent | rect. | 12 | 17 |
| 139 | 327.56 | temperature | 20 | 90 | > th | dose independent | rect. | 18 | 15 |
| 160 | 327.76 | temperature | 20 | 10 | < th | dose independent | rect. | 12 | 21 |
| 192 | 328.02 | temperature | 20 | 10 | < th | dose independent | rect. | 6 | 23 |
| 193 | 328.03 | temperature | 20 | 10 | > th | dose independent | rect. | 18 | 15 |
| 235 | 328.33 | temperature | 20 | 10 | > th | dose independent | rect. | 4 | 23 |
| 270 | 328.67 | temperature | 20 | 10 | > th | dose independent | rect. | 13 | 23 |
| 272 | 328.72 | temperature | 20 | 10 | < th | dose independent | rect. | 10 | 19 |
| 286 | 328.83 | temperature | 20 | 10 | < th | dose independent | rect. | 10 | 23 |
| 309 | 328.95 | temperature | 20 | 10 | < th | dose independent | no | NA | NA |
| 312 | 328.95 | temperature | 20 | 10 | < th | dose independent | rect. | 3 | 23 |
| 317 | 328.98 | temperature | 20 | 10 | < th | dose independent | rect. | 21 | 23 |
| 329 | 329.01 | temperature | 20 | 10 | < th | dose independent | rect. | 19 | 23 |
| 340 | 329.05 | temperature | 20 | 10 | < th | dose independent | rect. | 23 | 23 |
| 362 | 329.12 | temperature | 20 | 90 | > th | dose independent | rect. | 15 | 23 |
| 375 | 329.19 | temperature | 20 | 10 | > th | dose independent | no | NA | NA |
| 383 | 329.25 | temperature | 20 | 10 | > th | dose independent | rect. | 15 | 23 |
| 405 | 329.43 | temperature | 20 | 10 | > th | dose independent | rect. | 18 | 18 |
| 419 | 329.52 | temperature | 20 | 10 | < th | dose independent | rect. | 1 | 23 |
| 596 | 330.63 | humidity | 60 | 90 | < th | dose dependent | rect. | 9 | 1 |
| 693 | 331.14 | temperature | 20 | 10 | > th | dose independent | rect. | 21 | 15 |
| 738 | 331.36 | temperature | 25 | 270 | < th | dose dependent | rect. | 11 | 17 |
| 743 | 331.42 | humidity | 60 | 90 | < th | dose independent | rect. | 9 | 1 |
| 773 | 331.52 | temperature | 20 | 30 | < th | dose independent | rect. | 16 | 8 |
| 788 | 331.55 | temperature | 25 | 270 | < th | dose dependent | sin | 17 | NA |
| 796 | 331.60 | temperature | 25 | 720 | < th | dose dependent | rect. | 11 | 10 |
| 833 | 331.79 | temperature | 20 | 10 | > th | dose independent | rect. | 11 | 23 |
| 835 | 331.80 | temperature | 20 | 10 | > th | dose independent | rect. | 21 | 23 |
| 919 | 332.18 | temperature | 15 | 90 | > th | dose dependent | sin | 10 | NA |