Os02g0623300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0623300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 550.82 | 1.1 | 4.12 | -3.54 | 2.2 | 0.835 | -4.76 | -1.95 | -0.758 | 8.79 | 19.46 | 10 | -- | -- |
| 562.42 | 1.1 | 4.11 | -3.44 | 2.16 | 0.722 | -3.51 | -- | -0.717 | 8.57 | 19.22 | 9 | -- | -- |
| 611.89 | 1.15 | 4.11 | -3.58 | 2.15 | 0.743 | -- | -1.03 | -0.878 | 8.73 | 20.99 | 8 | -- | -- |
| 597.27 | 1.14 | 4.1 | -3.56 | 2.26 | 0.836 | -- | -- | -0.724 | 8.81 | 17.74 | 13 | -- | -- |
| 813.75 | 1.34 | 4.17 | -3.6 | -- | 0.135 | -- | -0.531 | -0.701 | -- | 28.82 | 11 | -- | -- |
| 585.06 | 1.13 | 4.13 | -3.51 | 1.89 | -- | -3.7 | -- | -0.733 | 7.66 | -- | -- | -- | -- |
| 623.75 | 1.17 | 4.12 | -3.6 | 1.89 | -- | -- | -- | -0.729 | 7.59 | -- | -- | -- | -- |
| 814.32 | 1.33 | 4.17 | -3.56 | -- | 0.158 | -- | -- | -0.704 | -- | 28.82 | 11 | -- | -- |
| 927.09 | 1.42 | 4.07 | -- | 2.34 | 0.968 | -- | -- | -0.403 | 9.14 | 15.98 | 14 | -- | -- |
| 815.96 | 1.33 | 4.17 | -3.57 | -- | -- | -- | -- | -0.7 | -- | -- | -- | -- | -- |
| 965.67 | 1.45 | 4.03 | -- | 1.86 | -- | -- | -- | -0.328 | 7.72 | -- | -- | -- | -- |
| 1105.59 | 1.55 | 4.08 | -- | -- | -0.646 | -- | -- | -0.317 | -- | 4.719 | 2 | -- | -- |
| 1153.07 | 1.58 | 4.08 | -- | -- | -- | -- | -- | -0.303 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 520.34 | humidity | 90 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 2 | 521.48 | humidity | 90 | 14400 | > th | dose independent | rect. | 1 | 4 |
| 4 | 521.92 | humidity | 90 | 14400 | < th | dose independent | rect. | 24 | 5 |
| 11 | 524.70 | humidity | 90 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 20 | 529.49 | humidity | 90 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 21 | 529.59 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 25 | 530.11 | humidity | 80 | 14400 | > th | dose dependent | rect. | 24 | 4 |
| 32 | 531.58 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 39 | 532.98 | humidity | 90 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 42 | 533.42 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 44 | 533.76 | humidity | 90 | 43200 | > th | dose dependent | rect. | 2 | 7 |
| 62 | 534.77 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 13 |
| 73 | 535.01 | humidity | 90 | 43200 | > th | dose dependent | sin | 7 | NA |
| 97 | 535.51 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 15 |
| 104 | 535.66 | humidity | 90 | 43200 | > th | dose independent | rect. | 2 | 9 |
| 140 | 536.11 | humidity | 90 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 148 | 536.18 | humidity | 90 | 43200 | > th | dose independent | sin | 7 | NA |
| 153 | 536.22 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 2 |
| 183 | 536.52 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 192 | 536.63 | humidity | 50 | 14400 | > th | dose dependent | rect. | 1 | 3 |
| 247 | 537.19 | humidity | 90 | 43200 | < th | dose independent | rect. | 19 | 17 |
| 318 | 537.72 | humidity | 90 | 43200 | < th | dose independent | rect. | 1 | 11 |
| 368 | 538.09 | humidity | 90 | 43200 | < th | dose independent | sin | 6 | NA |
| 375 | 538.13 | humidity | 90 | 43200 | < th | dose independent | rect. | 24 | 13 |
| 392 | 538.24 | humidity | 90 | 43200 | < th | dose independent | rect. | 2 | 9 |
| 397 | 538.26 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 425 | 538.44 | radiation | 20 | 10 | < th | dose independent | rect. | 24 | 23 |
| 471 | 538.77 | humidity | 90 | 43200 | > th | dose dependent | no | NA | NA |
| 486 | 538.92 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 4 |
| 492 | 538.94 | humidity | 90 | 43200 | > th | dose dependent | rect. | 24 | 23 |
| 561 | 539.46 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 21 |
| 627 | 539.87 | humidity | 90 | 43200 | < th | dose independent | rect. | 19 | 6 |
| 664 | 540.17 | humidity | 90 | 43200 | > th | dose independent | no | NA | NA |
| 668 | 540.20 | humidity | 90 | 43200 | < th | dose independent | rect. | 9 | 22 |
| 714 | 540.46 | humidity | 90 | 43200 | > th | dose independent | rect. | 24 | 23 |
| 721 | 540.51 | humidity | 90 | 43200 | < th | dose independent | no | NA | NA |
| 734 | 540.57 | humidity | 90 | 43200 | < th | dose independent | rect. | 24 | 23 |
| 780 | 540.86 | radiation | 10 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 793 | 540.87 | radiation | 20 | 10 | < th | dose independent | rect. | 8 | 15 |
| 827 | 541.08 | humidity | 90 | 43200 | > th | dose independent | rect. | 5 | 23 |
| 830 | 541.09 | humidity | 90 | 43200 | < th | dose independent | rect. | 4 | 23 |
| 852 | 541.22 | humidity | 90 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 928 | 541.78 | humidity | 90 | 43200 | < th | dose independent | sin | 15 | NA |
| 948 | 541.93 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 1 |