Os02g0622100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Dual specificity kinase 1.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0622100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Dual specificity kinase 1.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42.44 | 0.306 | 8.72 | 0.707 | 0.205 | 1.01 | -0.494 | 0.541 | 0.119 | 1.23 | 25.1 | 60 | -- | -- |
| 42.8 | 0.305 | 8.71 | 0.79 | 0.213 | 0.96 | -0.321 | -- | 0.138 | 1.02 | 25.2 | 65 | -- | -- |
| 43.15 | 0.306 | 8.71 | 0.785 | 0.21 | 0.981 | -- | 0.141 | 0.137 | 0.572 | 25.2 | 67 | -- | -- |
| 43.18 | 0.306 | 8.71 | 0.803 | 0.214 | 0.961 | -- | -- | 0.138 | 0.596 | 25.2 | 66 | -- | -- |
| 45.26 | 0.315 | 8.7 | 0.809 | -- | 1.06 | -- | 0.0955 | 0.173 | -- | 26.16 | 63 | -- | -- |
| 56.25 | 0.352 | 8.75 | 0.564 | 0.396 | -- | -0.314 | -- | -0.0557 | 1.31 | -- | -- | -- | -- |
| 56.65 | 0.352 | 8.75 | 0.575 | 0.396 | -- | -- | -- | -0.0538 | 1.22 | -- | -- | -- | -- |
| 45.28 | 0.315 | 8.7 | 0.824 | -- | 1.05 | -- | -- | 0.176 | -- | 26.16 | 63 | -- | -- |
| 58.62 | 0.359 | 8.74 | -- | 0.275 | 0.639 | -- | -- | -0.00558 | 1.24 | 25.2 | 41 | -- | -- |
| 66.36 | 0.381 | 8.75 | 0.59 | -- | -- | -- | -- | -0.0457 | -- | -- | -- | -- | -- |
| 65.35 | 0.378 | 8.77 | -- | 0.406 | -- | -- | -- | -0.118 | 1.28 | -- | -- | -- | -- |
| 62.06 | 0.368 | 8.73 | -- | -- | 0.815 | -- | -- | 0.0406 | -- | 26.16 | 63 | -- | -- |
| 75.54 | 0.406 | 8.76 | -- | -- | -- | -- | -- | -0.111 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.23 | temperature | 10 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 4 | 37.65 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 36 | 39.63 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 37 | 39.66 | temperature | 10 | 270 | > th | dose dependent | rect. | 18 | 9 |
| 55 | 40.00 | temperature | 20 | 10 | > th | dose independent | rect. | 8 | 21 |
| 83 | 40.56 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 9 |
| 84 | 40.56 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 15 |
| 85 | 40.59 | temperature | 25 | 10 | < th | dose dependent | rect. | 24 | 22 |
| 98 | 40.85 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 20 |
| 123 | 41.05 | temperature | 20 | 270 | > th | dose independent | rect. | 20 | 16 |
| 142 | 41.27 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 148 | 41.31 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 8 |
| 156 | 41.36 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 190 | 41.84 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 191 | 41.84 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 206 | 41.97 | temperature | 20 | 270 | > th | dose independent | rect. | 18 | 9 |
| 230 | 42.12 | temperature | 15 | 90 | > th | dose dependent | sin | 7 | NA |
| 253 | 42.21 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 256 | 42.24 | temperature | 30 | 90 | < th | dose dependent | sin | 7 | NA |
| 276 | 42.34 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 9 |
| 285 | 42.43 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 4 |
| 309 | 42.54 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 317 | 42.57 | temperature | 25 | 30 | < th | dose dependent | no | NA | NA |
| 327 | 42.58 | temperature | 25 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 343 | 42.62 | temperature | 25 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 345 | 42.63 | temperature | 25 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 350 | 42.65 | temperature | 25 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 362 | 42.67 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 367 | 42.68 | temperature | 25 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 678 | 43.68 | wind | 9 | 90 | < th | dose dependent | rect. | 8 | 21 |
| 703 | 43.76 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 17 |
| 735 | 43.88 | temperature | 20 | 10 | > th | dose independent | rect. | 21 | 17 |
| 748 | 43.91 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 811 | 44.12 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 10 |
| 862 | 44.25 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 869 | 44.27 | wind | 5 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 940 | 44.43 | atmosphere | 995 | 30 | > th | dose dependent | rect. | 5 | 3 |
| 945 | 44.45 | atmosphere | 1000 | 30 | > th | dose independent | rect. | 5 | 3 |
| 964 | 44.49 | radiation | 30 | 90 | < th | dose dependent | rect. | 5 | 3 |
| 984 | 44.52 | wind | 7 | 30 | < th | dose independent | rect. | 8 | 21 |
| 985 | 44.52 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 13 |