Os02g0621400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0621400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 80.46 | 0.421 | 9.74 | -0.0611 | 1.03 | 2.08 | -0.234 | -0.0397 | -0.47 | 22 | 12.8 | 233 | 13.2 | 6.95 |
| 80.45 | 0.418 | 9.74 | -0.0569 | 1.03 | 2.08 | -0.254 | -- | -0.469 | 22 | 12.63 | 232 | 13.2 | 6.94 |
| 80.64 | 0.418 | 9.74 | -0.0597 | 1.02 | 2.08 | -- | -0.13 | -0.471 | 22 | 12.61 | 231 | 13.2 | 6.93 |
| 80.68 | 0.418 | 9.74 | -0.0502 | 1.03 | 2.07 | -- | -- | -0.466 | 22 | 12.6 | 233 | 13.2 | 6.95 |
| 96.19 | 0.457 | 9.7 | -0.118 | -- | 2.81 | -- | -0.489 | -0.453 | -- | 6.855 | 391 | 12.3 | 8.05 |
| 138.66 | 0.552 | 9.75 | 0.118 | 2.19 | -- | 0.245 | -- | -0.357 | 19.9 | -- | -- | -- | -- |
| 138.83 | 0.552 | 9.75 | 0.111 | 2.19 | -- | -- | -- | -0.356 | 19.9 | -- | -- | -- | -- |
| 96.02 | 0.456 | 9.71 | -0.0652 | -- | 2.74 | -- | -- | -0.479 | -- | 7.302 | 377 | 12.3 | 8.42 |
| 80.72 | 0.418 | 9.74 | -- | 1.03 | 2.05 | -- | -- | -0.462 | 22 | 12.06 | 235 | 13.1 | 6.94 |
| 399.99 | 0.935 | 9.69 | 0.0875 | -- | -- | -- | -- | -0.386 | -- | -- | -- | -- | -- |
| 139.16 | 0.552 | 9.75 | -- | 2.19 | -- | -- | -- | -0.369 | 19.9 | -- | -- | -- | -- |
| 95.94 | 0.456 | 9.72 | -- | -- | 2.74 | -- | -- | -0.49 | -- | 8.152 | 387 | 12.1 | 8.62 |
| 400.2 | 0.934 | 9.7 | -- | -- | -- | -- | -- | -0.395 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 81.50 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 13 | 7 |
| 13 | 86.35 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 14 | 15 |
| 14 | 86.42 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 15 | 6 |
| 17 | 86.86 | radiation | 1.0 | 270 | < th | dose independent | rect. | 16 | 9 |
| 21 | 86.99 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 16 | 9 |
| 29 | 87.75 | humidity | 50.0 | 270 | > th | dose independent | rect. | 8 | 16 |
| 34 | 87.97 | humidity | 90.0 | 270 | < th | dose independent | rect. | 13 | 6 |
| 55 | 89.42 | humidity | 70.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 56 | 89.46 | humidity | 70.0 | 270 | > th | dose independent | rect. | 18 | 6 |
| 60 | 89.52 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 65 | 89.69 | temperature | 30.0 | 270 | < th | dose independent | rect. | 8 | 16 |
| 66 | 89.73 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 8 |
| 74 | 90.15 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 17 | 7 |
| 80 | 90.58 | radiation | 1.0 | 270 | > th | dose independent | sin | 15 | NA |
| 86 | 90.81 | radiation | 1.0 | 270 | < th | dose dependent | sin | 16 | NA |
| 92 | 90.84 | radiation | 1.0 | 270 | < th | dose independent | sin | 15 | NA |
| 102 | 91.08 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 19 |
| 103 | 91.08 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 19 |
| 117 | 91.33 | temperature | 20.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 119 | 91.38 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 19 |
| 130 | 91.51 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 6 |
| 144 | 91.81 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 6 |
| 147 | 91.81 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 6 |
| 154 | 92.02 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 15 | 6 |
| 176 | 92.41 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 5 |
| 178 | 92.41 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 5 |
| 180 | 92.41 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 5 |
| 181 | 92.41 | radiation | 1.0 | 270 | < th | dose independent | rect. | 19 | 5 |
| 187 | 92.41 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 19 |
| 188 | 92.41 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 19 |
| 194 | 92.44 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 15 |
| 195 | 92.44 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 15 |
| 204 | 92.54 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 5 |
| 212 | 92.69 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 214 | 92.69 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 13 | 6 |
| 216 | 92.69 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 18 |
| 217 | 92.69 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 18 |
| 228 | 92.85 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 18 |
| 256 | 93.37 | radiation | 1.0 | 270 | > th | dose independent | rect. | 14 | 15 |
| 260 | 93.41 | radiation | 1.0 | 270 | > th | dose independent | rect. | 14 | 5 |
| 290 | 93.59 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 18 |
| 327 | 93.86 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 8 |
| 329 | 93.86 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 8 |
| 337 | 93.97 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 15 |
| 340 | 93.98 | wind | 1.0 | 270 | > th | dose independent | rect. | 19 | 5 |
| 379 | 94.36 | wind | 7.0 | 270 | < th | dose independent | rect. | 24 | 8 |
| 389 | 94.49 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 8 |
| 393 | 94.50 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 8 |
| 395 | 94.50 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 8 |
| 396 | 94.50 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 8 |
| 398 | 94.50 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 8 |
| 399 | 94.50 | temperature | 10.0 | 270 | > th | dose independent | rect. | 8 | 16 |
| 436 | 94.79 | radiation | 40.0 | 270 | < th | dose independent | rect. | 24 | 8 |
| 439 | 94.82 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 18 |
| 441 | 94.82 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 18 |
| 446 | 94.87 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 9 | 15 |
| 448 | 94.92 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 5 |
| 449 | 94.92 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 5 |
| 493 | 95.19 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 24 | 8 |
| 497 | 95.22 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 510 | 95.30 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 15 | 6 |
| 511 | 95.30 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 15 | 6 |
| 566 | 95.51 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 567 | 95.51 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 568 | 95.51 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 15 |
| 575 | 95.57 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 9 |
| 577 | 95.57 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 9 |
| 620 | 95.97 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 636 | 96.09 | temperature | 25.0 | 270 | > th | dose dependent | sin | 16 | NA |
| 651 | 96.19 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 18 |
| 653 | 96.19 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 18 |
| 674 | 96.30 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 8 | 16 |
| 686 | 96.39 | wind | 9.0 | 90 | < th | dose independent | rect. | 15 | 6 |
| 720 | 96.52 | wind | 1.0 | 270 | > th | dose independent | rect. | 20 | 3 |
| 722 | 96.54 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 17 | 7 |
| 740 | 96.69 | wind | 9.0 | 270 | < th | dose independent | rect. | 8 | 16 |
| 753 | 96.74 | wind | 9.0 | 10 | < th | dose independent | rect. | 3 | 18 |
| 758 | 96.77 | temperature | 25.0 | 10 | > th | dose independent | rect. | 16 | 5 |
| 772 | 96.85 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 13 | 6 |
| 773 | 96.86 | radiation | 40.0 | 90 | < th | dose independent | rect. | 15 | 6 |
| 786 | 96.95 | radiation | 1.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 810 | 97.07 | temperature | 10.0 | 10 | > th | dose independent | rect. | 21 | 6 |
| 811 | 97.07 | temperature | 30.0 | 10 | < th | dose independent | rect. | 21 | 6 |
| 812 | 97.07 | humidity | 50.0 | 10 | > th | dose independent | rect. | 21 | 6 |
| 815 | 97.07 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 21 | 6 |
| 816 | 97.07 | radiation | 1.0 | 10 | < th | dose independent | rect. | 21 | 6 |
| 821 | 97.07 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 18 |
| 823 | 97.07 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 3 | 18 |
| 824 | 97.07 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 21 | 6 |
| 831 | 97.08 | temperature | 10.0 | 90 | > th | dose independent | rect. | 15 | 6 |
| 833 | 97.08 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 15 | 6 |
| 873 | 97.18 | wind | 9.0 | 10 | < th | dose independent | rect. | 21 | 6 |
| 876 | 97.18 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 19 |
| 882 | 97.21 | humidity | 70.0 | 270 | > th | dose independent | rect. | 11 | 13 |
| 883 | 97.21 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 16 | 16 |
| 949 | 97.47 | temperature | 25.0 | 270 | > th | dose independent | rect. | 15 | 3 |
| 955 | 97.51 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 21 | 6 |
| 989 | 97.64 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 15 | 6 |
| 993 | 97.66 | wind | 1.0 | 270 | > th | dose independent | rect. | 24 | 19 |
| 1000 | 97.71 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 13 | 7 |