Os02g0618000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0618000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 293.6 | 0.805 | 6.82 | 0.595 | 1.29 | 0.00499 | 2.59 | -11.6 | -1.3 | 16.1 | 30.45 | 1167 | -- | -- |
| 319.2 | 0.832 | 6.54 | 2.16 | 1.36 | -1.08 | 2.93 | -- | -1.07 | 16.6 | 28.04 | 5432 | -- | -- |
| 312.41 | 0.823 | 6.83 | 0.534 | 1.31 | 0.0328 | -- | -12.3 | -1.3 | 16.3 | 30.53 | 1167 | -- | -- |
| 318.23 | 0.831 | 6.54 | 2.72 | 1.31 | -1.47 | -- | -- | -0.998 | 16.5 | 27.05 | 1177 | -- | -- |
| 402.84 | 0.935 | 6.89 | 0.0279 | -- | 0.214 | -- | -15.4 | -1.36 | -- | 30.82 | 1175 | -- | -- |
| 378.83 | 0.912 | 6.55 | 2.14 | 1.46 | -- | 2.97 | -- | -1.06 | 15.8 | -- | -- | -- | -- |
| 405.04 | 0.942 | 6.54 | 2.19 | 1.48 | -- | -- | -- | -1.04 | 15.9 | -- | -- | -- | -- |
| 406.98 | 0.94 | 6.52 | 2.67 | -- | -1.7 | -- | -- | -0.982 | -- | 26.04 | 1213 | -- | -- |
| 481 | 1.02 | 6.65 | -- | 1.31 | -1.01 | -- | -- | -1.49 | 16.3 | 31.96 | 1166 | -- | -- |
| 524.88 | 1.07 | 6.54 | 2.13 | -- | -- | -- | -- | -1.08 | -- | -- | -- | -- | -- |
| 531.31 | 1.08 | 6.59 | -- | 1.43 | -- | -- | -- | -1.29 | 15.9 | -- | -- | -- | -- |
| 573.2 | 1.12 | 6.64 | -- | -- | -1.18 | -- | -- | -1.56 | -- | 31.37 | 1172 | -- | -- |
| 644.32 | 1.18 | 6.59 | -- | -- | -- | -- | -- | -1.32 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 292.31 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 15 |
| 5 | 295.86 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 12 |
| 22 | 297.67 | temperature | 25 | 720 | > th | dose dependent | sin | 12 | NA |
| 37 | 301.50 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 2 |
| 45 | 303.17 | temperature | 30 | 1440 | > th | dose dependent | rect. | 16 | 20 |
| 65 | 304.07 | temperature | 30 | 1440 | > th | dose dependent | rect. | 13 | 22 |
| 81 | 304.32 | temperature | 30 | 1440 | > th | dose dependent | rect. | 13 | 6 |
| 95 | 304.33 | temperature | 30 | 1440 | > th | dose dependent | rect. | 10 | 9 |
| 139 | 304.37 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 281 | 304.88 | temperature | 30 | 4320 | > th | dose dependent | rect. | 16 | 3 |
| 296 | 304.93 | temperature | 30 | 720 | > th | dose independent | rect. | 17 | 2 |
| 388 | 305.54 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 9 |
| 428 | 306.17 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 18 |
| 432 | 306.22 | temperature | 30 | 1440 | > th | dose independent | rect. | 17 | 18 |
| 433 | 306.25 | temperature | 30 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 436 | 306.34 | temperature | 25 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 493 | 306.78 | temperature | 30 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 570 | 307.70 | temperature | 30 | 1440 | > th | dose independent | sin | 10 | NA |
| 572 | 307.78 | temperature | 30 | 1440 | < th | dose independent | sin | 10 | NA |
| 576 | 307.82 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 606 | 308.25 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 15 |
| 611 | 308.46 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 5 |
| 632 | 308.49 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 3 |
| 642 | 308.61 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 2 |
| 645 | 308.61 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 7 |
| 650 | 308.64 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 733 | 309.54 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 745 | 309.61 | temperature | 25 | 1440 | > th | dose dependent | rect. | 3 | 5 |
| 798 | 309.92 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 859 | 310.31 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 8 |
| 869 | 310.36 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 10 |
| 886 | 310.46 | temperature | 30 | 1440 | < th | dose independent | rect. | 20 | 16 |
| 888 | 310.47 | temperature | 30 | 1440 | < th | dose independent | rect. | 23 | 13 |