Os02g0617900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0617900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 40.96 | 0.298 | 10.5 | -0.195 | 0.576 | 1.25 | 0.258 | 0.0641 | -0.254 | 13.8 | 10 | 10 | -- | -- |
| 40.96 | 0.298 | 10.5 | -0.203 | 0.577 | 1.25 | 0.275 | -- | -0.256 | 13.8 | 10.82 | 9 | -- | -- |
| 41.13 | 0.299 | 10.5 | -0.146 | 0.57 | 1.26 | -- | 0.377 | -0.243 | 13.7 | 10.84 | 9 | -- | -- |
| 41.26 | 0.299 | 10.5 | -0.198 | 0.572 | 1.27 | -- | -- | -0.257 | 13.7 | 10.04 | 9 | -- | -- |
| 54.39 | 0.343 | 10.5 | -0.276 | -- | 1.93 | -- | 0.493 | -0.34 | -- | 9.769 | 7 | -- | -- |
| 55.7 | 0.35 | 10.5 | 0.0351 | 0.93 | -- | 0.453 | -- | -0.0806 | 14 | -- | -- | -- | -- |
| 56.48 | 0.352 | 10.5 | 0.0487 | 0.93 | -- | -- | -- | -0.0781 | 14 | -- | -- | -- | -- |
| 54.59 | 0.344 | 10.5 | -0.344 | -- | 1.94 | -- | -- | -0.359 | -- | 8.899 | 7 | -- | -- |
| 42.19 | 0.303 | 10.5 | -- | 0.603 | 1.17 | -- | -- | -0.223 | 13.8 | 11.95 | 9 | -- | -- |
| 108.54 | 0.487 | 10.5 | 0.0102 | -- | -- | -- | -- | -0.0998 | -- | -- | -- | -- | -- |
| 56.55 | 0.352 | 10.5 | -- | 0.929 | -- | -- | -- | -0.0835 | 14 | -- | -- | -- | -- |
| 57.52 | 0.353 | 10.5 | -- | -- | 1.84 | -- | -- | -0.309 | -- | 7.865 | 7 | -- | -- |
| 108.54 | 0.486 | 10.5 | -- | -- | -- | -- | -- | -0.101 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.97 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 21 |
| 3 | 39.20 | temperature | 15 | 90 | > th | dose dependent | rect. | 5 | 22 |
| 6 | 39.34 | temperature | 15 | 270 | > th | dose dependent | rect. | 5 | 19 |
| 10 | 39.49 | temperature | 15 | 90 | > th | dose dependent | rect. | 8 | 18 |
| 11 | 39.54 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 14 | 39.65 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 23 | 39.87 | temperature | 10 | 10 | > th | dose dependent | sin | 2 | NA |
| 26 | 39.88 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 18 |
| 37 | 39.99 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 17 |
| 42 | 40.03 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 21 |
| 62 | 40.20 | temperature | 20 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 72 | 40.27 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 87 | 40.50 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 16 |
| 149 | 40.88 | temperature | 30 | 10 | < th | dose dependent | sin | 1 | NA |
| 157 | 40.96 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 177 | 41.08 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 210 | 41.30 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 229 | 41.37 | temperature | 10 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 242 | 41.42 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 263 | 41.61 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 290 | 41.73 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 312 | 41.85 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 325 | 41.91 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 20 |
| 329 | 41.93 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 332 | 41.95 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 334 | 41.95 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 340 | 41.97 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 346 | 42.00 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 354 | 42.04 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 400 | 42.26 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 457 | 42.53 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 473 | 42.61 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 481 | 42.62 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 607 | 43.21 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 737 | 43.74 | temperature | 20 | 90 | > th | dose dependent | rect. | 19 | 20 |
| 898 | 44.11 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 13 |
| 951 | 44.25 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 16 |
| 995 | 44.33 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 12 |