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Os02g0617600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.94 (0.0256) R2 : 0.783
β1 : -2.42 (0.0935) R2dD : 0.33 R2D : 0.317
β2 : 2.08 (0.0667) R2dC : 0.466 R2C : 0.452
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0115 (0.0545) R2dN8 : 2.82e-05 R2N8 : -0.000887
σ : 0.48
deviance : 105.2
__
_____
C
peak time of C : 6.1
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
94.89 0.458 9.94 -2.38 2.19 -0.89 0.0241 3.32 -0.0441 6.01 94.46 30 -- --
98.68 0.463 9.94 -2.32 2.18 -1.29 0.61 -- -0.0249 5.97 94.89 25 -- --
94.78 0.453 9.94 -2.39 2.19 -1.07 -- 3.49 -0.0439 6.01 94.65 24 -- --
98.75 0.463 9.95 -2.44 2.15 -1.4 -- -- -0.0343 6.05 94.95 24 -- --
216.29 0.685 9.82 -2.25 -- 1.79 -- -2.24 0.425 -- 69.99 439 -- --
104.81 0.48 9.94 -2.42 2.08 -- 0.396 -- 0.0128 6.1 -- -- -- --
105.2 0.48 9.94 -2.42 2.08 -- -- -- 0.0115 6.1 -- -- -- --
187.73 0.638 9.95 -2.4 -- 2.04 -- -- 0.151 -- 61.57 422 -- --
247.62 0.733 9.9 -- 2.33 -0.704 -- -- 0.137 5.8 90 5 -- --
330.14 0.849 9.97 -2.36 -- -- -- -- 0.0581 -- -- -- -- --
259.46 0.753 9.88 -- 2.05 -- -- -- 0.281 6.16 -- -- -- --
335.69 0.853 9.91 -- -- 2.29 -- -- 0.355 -- -11.16 439 -- --
477.08 1.02 9.92 -- -- -- -- -- 0.32 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 85.57 humidity 90.0 270 < th dose independent rect. 11 6
2 86.01 precipitation 0.1 270 < th dose independent rect. 2 10
3 86.01 precipitation 0.1 270 < th dose dependent rect. 2 10
4 86.12 humidity 50.0 270 > th dose dependent rect. 21 10
5 86.27 temperature 30.0 90 < th dose independent rect. 17 20
6 86.52 radiation 20.0 270 < th dose dependent rect. 14 8
10 86.73 radiation 10.0 270 < th dose independent rect. 15 7
11 86.77 temperature 10.0 270 > th dose dependent rect. 11 6
26 87.50 temperature 10.0 270 > th dose independent rect. 2 10
27 87.50 atmosphere 995.0 270 > th dose independent rect. 2 10
28 87.50 atmosphere 1015.0 270 < th dose independent rect. 2 10
29 87.50 temperature 10.0 270 > th dose independent rect. 12 14
30 87.53 temperature 20.0 270 > th dose independent rect. 11 6
37 87.65 humidity 50.0 270 > th dose independent rect. 16 19
38 87.65 temperature 10.0 90 > th dose dependent rect. 13 15
39 87.67 precipitation 0.1 270 < th dose independent rect. 17 18
40 87.67 precipitation 0.1 270 < th dose dependent rect. 17 18
47 87.77 wind 9.0 270 < th dose independent rect. 12 14
48 87.80 temperature 10.0 270 > th dose dependent rect. 11 15
52 88.02 wind 3.0 270 > th dose independent rect. 13 2
56 88.04 wind 9.0 270 < th dose independent rect. 11 6
57 88.04 radiation 1.0 270 > th dose independent rect. 11 6
59 88.05 humidity 60.0 90 > th dose dependent rect. 23 10
61 88.07 humidity 90.0 270 < th dose independent rect. 13 2
65 88.12 wind 9.0 270 < th dose independent rect. 2 10
67 88.12 radiation 30.0 270 < th dose dependent rect. 21 10
68 88.13 temperature 20.0 270 > th dose independent rect. 12 4
75 88.21 temperature 10.0 270 > th dose dependent rect. 22 19
77 88.23 wind 3.0 270 > th dose independent rect. 12 4
78 88.23 precipitation 0.1 270 < th dose independent rect. 11 6
79 88.23 precipitation 0.1 270 < th dose dependent rect. 11 6
83 88.29 temperature 10.0 270 > th dose dependent rect. 13 2
88 88.32 radiation 1.0 270 > th dose dependent rect. 12 5
95 88.41 radiation 30.0 270 > th dose independent rect. 12 21
96 88.42 humidity 50.0 270 > th dose independent rect. 16 6
99 88.44 wind 9.0 270 < th dose independent rect. 17 18
103 88.46 atmosphere 1015.0 270 < th dose independent rect. 11 6
104 88.46 temperature 10.0 270 > th dose independent rect. 17 18
111 88.51 wind 1.0 270 > th dose independent rect. 11 6
125 88.58 precipitation 0.1 270 < th dose independent rect. 12 14
127 88.58 precipitation 0.1 270 < th dose dependent rect. 12 14
133 88.62 temperature 20.0 270 > th dose independent rect. 13 2
142 88.72 radiation 40.0 90 < th dose independent rect. 13 4
144 88.74 radiation 20.0 270 < th dose independent rect. 21 10
154 88.80 humidity 70.0 270 > th dose independent rect. 21 10
156 88.82 wind 1.0 270 > th dose dependent rect. 13 2
157 88.83 radiation 1.0 90 > th dose independent rect. 13 6
173 88.84 humidity 50.0 270 > th dose independent rect. 15 21
185 88.92 radiation 10.0 270 > th dose dependent rect. 12 21
189 88.95 precipitation 0.1 270 < th dose independent rect. 15 22
190 88.95 precipitation 0.1 270 < th dose dependent rect. 15 22
195 88.97 atmosphere 995.0 270 > th dose independent rect. 11 6
202 88.99 temperature 10.0 270 > th dose independent rect. 21 10
203 88.99 temperature 30.0 270 < th dose independent rect. 21 10
204 88.99 humidity 50.0 270 > th dose independent rect. 21 10
206 88.99 atmosphere 995.0 270 > th dose independent rect. 21 10
208 88.99 temperature 10.0 270 > th dose independent rect. 7 14
218 89.03 radiation 20.0 270 > th dose independent rect. 12 4
232 89.07 temperature 20.0 90 > th dose independent rect. 13 15
251 89.11 wind 9.0 270 < th dose independent rect. 22 19
260 89.16 wind 1.0 90 > th dose dependent rect. 13 4
262 89.18 precipitation 0.1 270 < th dose independent rect. 13 2
263 89.18 wind 7.0 270 < th dose independent rect. 17 5
264 89.18 precipitation 0.1 270 < th dose dependent rect. 13 2
271 89.21 wind 9.0 270 < th dose independent rect. 21 10
272 89.23 temperature 10.0 270 > th dose independent rect. 13 2
274 89.23 atmosphere 1010.0 270 < th dose independent rect. 13 2
276 89.23 temperature 10.0 270 > th dose independent rect. 15 22
292 89.25 temperature 30.0 270 < th dose independent rect. 3 9
297 89.28 temperature 15.0 270 > th dose independent rect. 22 19
300 89.30 atmosphere 1015.0 270 < th dose independent rect. 7 14
310 89.34 atmosphere 995.0 90 > th dose independent rect. 17 20
311 89.35 humidity 50.0 270 > th dose independent rect. 2 10
320 89.39 temperature 30.0 270 < th dose independent rect. 7 15
323 89.40 precipitation 0.1 270 < th dose independent rect. 17 5
325 89.40 precipitation 0.1 270 < th dose dependent rect. 17 5
326 89.41 atmosphere 995.0 270 > th dose independent rect. 12 4
335 89.44 radiation 10.0 270 < th dose dependent rect. 8 14
345 89.49 radiation 40.0 270 < th dose dependent sin 17 NA
356 89.53 radiation 40.0 270 < th dose independent rect. 17 18
359 89.54 precipitation 0.1 270 < th dose independent rect. 7 14
360 89.54 precipitation 0.1 270 < th dose dependent rect. 7 14
364 89.56 atmosphere 995.0 270 > th dose independent rect. 13 2
365 89.56 temperature 10.0 270 > th dose independent rect. 17 5
384 89.60 temperature 20.0 10 > th dose independent rect. 13 15
388 89.61 radiation 1.0 30 < th dose dependent rect. 17 8
410 89.67 atmosphere 995.0 270 > th dose independent rect. 12 14
421 89.72 atmosphere 995.0 270 > th dose independent rect. 17 18
423 89.72 wind 9.0 270 < th dose dependent rect. 16 6
429 89.75 humidity 70.0 270 > th dose independent rect. 15 7
454 89.79 humidity 70.0 270 < th dose independent rect. 13 2
455 89.79 temperature 30.0 270 < th dose independent rect. 17 4
478 89.87 wind 1.0 270 > th dose independent rect. 17 5
483 89.89 radiation 30.0 270 < th dose independent sin 14 NA
497 89.93 temperature 30.0 270 < th dose independent rect. 16 6
504 89.94 radiation 30.0 90 < th dose dependent sin 14 NA
527 90.02 radiation 30.0 270 > th dose independent sin 14 NA
553 90.08 radiation 20.0 270 > th dose dependent sin 14 NA
577 90.15 atmosphere 1015.0 270 < th dose independent rect. 17 5
578 90.15 radiation 1.0 270 > th dose dependent sin 16 NA
596 90.19 atmosphere 995.0 270 > th dose independent rect. 22 19
627 90.25 radiation 10.0 270 < th dose dependent sin 19 NA
643 90.30 radiation 40.0 270 < th dose dependent rect. 7 15
683 90.37 radiation 1.0 90 < th dose independent sin 17 NA
689 90.38 humidity 50.0 90 > th dose dependent rect. 17 6
693 90.40 atmosphere 1015.0 90 < th dose dependent rect. 23 10
697 90.41 wind 9.0 270 < th dose dependent rect. 17 4
714 90.43 humidity 50.0 270 > th dose independent rect. 13 2
716 90.43 precipitation 0.1 270 < th dose independent rect. 21 10
723 90.43 precipitation 0.1 270 < th dose dependent rect. 21 10
759 90.48 radiation 1.0 270 < th dose independent rect. 8 13
760 90.48 precipitation 0.1 270 < th dose independent rect. 22 19
764 90.48 precipitation 0.1 270 < th dose dependent rect. 22 19
765 90.49 radiation 1.0 90 > th dose independent sin 17 NA
783 90.52 wind 9.0 270 < th dose independent rect. 7 14
833 90.60 humidity 90.0 270 < th dose dependent rect. 12 4
844 90.63 atmosphere 1015.0 270 < th dose independent rect. 22 19
916 90.73 humidity 90.0 270 < th dose dependent rect. 13 2
922 90.75 radiation 1.0 90 > th dose independent rect. 4 9
937 90.76 atmosphere 995.0 270 > th dose independent rect. 17 5