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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0616600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.2 (0.0324) R2 : 0.00159
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.058 (0.0681) R2dN8 : 0.00205 R2N8 : 0.00159
σ : 0.609
deviance : 170.37
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
160.67 0.596 3.21 -0.0258 0.322 0.847 -0.0389 1.43 -0.00749 22.3 22.1 1090 -- --
162.5 0.594 3.19 0.0975 0.309 0.519 -0.221 -- 0.0173 22.5 22.84 1099 -- --
160.64 0.59 3.21 -0.0301 0.316 0.856 -- 1.48 -0.0075 22.3 22.14 1134 -- --
162.65 0.594 3.19 0.109 0.309 0.487 -- -- 0.0271 22.2 23.66 1118 -- --
166.2 0.6 3.2 -0.0341 -- 0.789 -- 1.41 -0.011 -- 22.3 1306 -- --
165.64 0.603 3.2 -0.0386 0.275 -- -0.161 -- -0.062 22.2 -- -- -- --
165.71 0.603 3.2 -0.0314 0.278 -- -- -- -0.0611 21.9 -- -- -- --
167.29 0.605 3.18 0.0683 -- 0.435 -- -- 0.00995 -- 24.2 1549 -- --
162.91 0.594 3.19 -- 0.307 0.431 -- -- 0.00925 22.2 23.8 1112 -- --
170.35 0.61 3.2 -0.0283 -- -- -- -- -0.0611 -- -- -- -- --
165.74 0.602 3.2 -- 0.278 -- -- -- -0.0576 21.9 -- -- -- --
167.41 0.605 3.18 -- -- 0.412 -- -- -0.000816 -- 24.2 1549 -- --
170.37 0.609 3.2 -- -- -- -- -- -0.058 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 157.03 wind 3.0 10 < th dose independent rect. 24 1
2 157.45 wind 5.0 10 < th dose dependent rect. 24 1
8 157.79 temperature 30.0 30 < th dose dependent rect. 24 1
10 157.86 humidity 80.0 10 > th dose independent rect. 24 1
14 158.01 atmosphere 1000.0 30 > th dose dependent rect. 24 1
17 158.03 humidity 50.0 10 > th dose dependent rect. 24 1
22 158.05 temperature 10.0 10 > th dose independent rect. 24 1
23 158.05 temperature 30.0 10 < th dose independent rect. 24 1
24 158.05 humidity 50.0 10 > th dose independent rect. 24 1
27 158.05 atmosphere 995.0 10 > th dose independent rect. 24 1
28 158.05 radiation 1.0 10 < th dose independent rect. 24 1
33 158.05 precipitation 0.1 10 < th dose independent rect. 24 1
34 158.05 temperature 10.0 10 > th dose independent rect. 1 23
35 158.05 humidity 70.0 30 > th dose dependent rect. 24 1
36 158.05 radiation 1.0 10 < th dose dependent rect. 24 1
41 158.05 precipitation 0.1 10 < th dose dependent rect. 24 1
42 158.05 temperature 25.0 270 > th dose dependent rect. 23 2
43 158.06 temperature 25.0 270 > th dose independent rect. 23 2
74 158.26 atmosphere 1015.0 30 < th dose independent rect. 24 1
75 158.29 temperature 10.0 30 > th dose dependent rect. 3 20
76 158.30 wind 1.0 30 > th dose independent rect. 24 1
79 158.33 temperature 10.0 30 > th dose dependent rect. 24 1
81 158.34 wind 9.0 30 < th dose independent rect. 1 23
91 158.48 humidity 90.0 30 < th dose independent rect. 24 1
92 158.51 temperature 20.0 30 > th dose independent rect. 3 20
93 158.52 temperature 10.0 1440 > th dose independent rect. 1 1
96 158.52 temperature 30.0 1440 < th dose independent rect. 1 1
100 158.52 humidity 50.0 1440 > th dose independent rect. 1 1
110 158.52 atmosphere 995.0 1440 > th dose independent rect. 1 1
111 158.52 radiation 1.0 1440 < th dose independent rect. 1 1
131 158.52 temperature 10.0 1440 > th dose independent rect. 2 23
134 158.52 radiation 1.0 1440 < th dose dependent rect. 1 1
142 158.55 wind 9.0 4320 < th dose independent rect. 1 1
152 158.65 atmosphere 1015.0 30 < th dose dependent rect. 24 1
158 158.69 temperature 25.0 30 > th dose dependent rect. 24 1
165 158.75 humidity 90.0 30 < th dose dependent rect. 24 1
176 158.97 atmosphere 1005.0 10 > th dose dependent rect. 24 3
183 159.10 temperature 20.0 270 > th dose independent rect. 3 17
193 159.17 atmosphere 1000.0 90 > th dose dependent rect. 23 4
197 159.25 temperature 20.0 270 > th dose independent rect. 1 20
203 159.33 wind 3.0 30 < th dose independent rect. 23 4
209 159.39 temperature 10.0 10 > th dose dependent rect. 1 23
216 159.44 wind 3.0 270 < th dose independent rect. 19 6
220 159.47 wind 1.0 14400 < th dose independent rect. 20 4
224 159.48 wind 3.0 270 < th dose independent rect. 16 9
228 159.50 wind 3.0 270 < th dose independent rect. 22 2
231 159.51 wind 1.0 14400 < th dose independent rect. 17 11
236 159.53 wind 1.0 30 > th dose dependent rect. 24 1
241 159.56 temperature 10.0 90 > th dose dependent rect. 1 22
245 159.57 temperature 10.0 270 > th dose dependent rect. 1 20
246 159.58 temperature 25.0 4320 > th dose independent rect. 23 1
252 159.61 wind 3.0 14400 < th dose dependent rect. 20 4
255 159.62 wind 1.0 14400 > th dose independent rect. 16 12
267 159.65 radiation 1.0 14400 < th dose dependent rect. 3 1
269 159.67 wind 1.0 14400 < th dose independent sin 15 NA
274 159.68 wind 1.0 14400 > th dose independent rect. 20 8
280 159.70 humidity 90.0 270 < th dose independent rect. 23 2
285 159.71 wind 5.0 30 < th dose dependent rect. 23 4
287 159.73 wind 1.0 14400 > th dose independent rect. 22 2
291 159.74 wind 3.0 14400 < th dose dependent rect. 17 10
299 159.78 wind 1.0 14400 > th dose independent sin 15 NA
321 159.84 humidity 80.0 270 > th dose independent rect. 21 4
323 159.84 radiation 40.0 43200 < th dose dependent rect. 1 1
331 159.86 temperature 20.0 270 > th dose independent rect. 1 7
334 159.86 wind 1.0 14400 < th dose dependent rect. 15 9
338 159.88 temperature 25.0 4320 < th dose independent rect. 23 1
346 159.91 temperature 15.0 720 > th dose dependent rect. 3 2
350 159.92 wind 9.0 14400 < th dose independent rect. 5 5
353 159.93 wind 1.0 14400 < th dose independent rect. 15 9
396 160.03 temperature 20.0 720 > th dose independent rect. 1 12
403 160.05 temperature 20.0 10 > th dose dependent rect. 2 1
411 160.07 wind 9.0 270 < th dose dependent rect. 21 4
413 160.08 temperature 20.0 720 > th dose independent rect. 3 10
416 160.08 temperature 15.0 270 > th dose dependent rect. 1 7
450 160.15 atmosphere 1005.0 30 > th dose independent rect. 23 4
471 160.19 wind 9.0 1440 < th dose independent rect. 3 1
472 160.19 temperature 10.0 1440 > th dose independent rect. 3 1
475 160.19 temperature 30.0 1440 < th dose independent rect. 3 1
479 160.19 humidity 50.0 1440 > th dose independent rect. 3 1
488 160.19 atmosphere 995.0 1440 > th dose independent rect. 3 1
489 160.19 radiation 1.0 1440 < th dose independent rect. 3 1
512 160.19 temperature 10.0 1440 > th dose independent rect. 4 23
515 160.19 radiation 1.0 1440 < th dose dependent rect. 3 1
534 160.21 wind 3.0 10 < th dose dependent rect. 2 1
537 160.21 temperature 10.0 30 > th dose dependent rect. 3 6
538 160.22 wind 1.0 10 < th dose independent rect. 2 1
542 160.22 temperature 15.0 10 > th dose dependent rect. 20 13
551 160.25 wind 1.0 270 > th dose independent rect. 22 3
563 160.27 wind 3.0 14400 < th dose dependent sin 14 NA
565 160.27 temperature 10.0 720 > th dose dependent rect. 20 17
572 160.29 humidity 80.0 30 > th dose independent rect. 23 4
575 160.29 humidity 70.0 30 > th dose independent rect. 1 22
579 160.30 humidity 90.0 30 > th dose independent rect. 2 1
602 160.32 wind 1.0 14400 < th dose dependent rect. 12 12
612 160.34 temperature 15.0 720 > th dose dependent rect. 18 14
613 160.35 temperature 20.0 30 > th dose independent rect. 3 6
626 160.37 humidity 80.0 30 > th dose dependent rect. 2 1
631 160.38 precipitation 0.1 270 < th dose independent rect. 21 4
634 160.38 precipitation 0.1 270 < th dose dependent rect. 21 4
689 160.44 temperature 20.0 30 > th dose independent rect. 2 1
699 160.44 temperature 15.0 720 > th dose dependent rect. 1 5
701 160.45 temperature 20.0 720 > th dose independent rect. 3 1
707 160.46 temperature 15.0 270 > th dose independent rect. 21 4
713 160.46 atmosphere 1005.0 30 > th dose dependent rect. 2 1
722 160.47 temperature 15.0 1440 > th dose independent rect. 4 6
730 160.47 temperature 10.0 720 > th dose dependent rect. 1 12
759 160.51 humidity 70.0 30 > th dose independent rect. 3 20
766 160.52 atmosphere 1005.0 30 > th dose independent rect. 2 1
768 160.52 temperature 30.0 270 < th dose independent rect. 21 4
769 160.52 humidity 50.0 270 > th dose independent rect. 21 4
772 160.52 atmosphere 995.0 270 > th dose independent rect. 21 4
775 160.52 radiation 1.0 270 < th dose independent rect. 21 4
782 160.52 atmosphere 995.0 30 > th dose independent rect. 9 18
783 160.52 wind 9.0 270 < th dose independent rect. 1 20
784 160.52 temperature 10.0 270 > th dose independent rect. 1 20
786 160.52 radiation 1.0 270 < th dose dependent rect. 21 4
810 160.54 temperature 10.0 30 > th dose independent rect. 2 1
812 160.54 temperature 30.0 30 < th dose independent rect. 2 1
813 160.54 humidity 50.0 30 > th dose independent rect. 2 1
816 160.54 atmosphere 995.0 30 > th dose independent rect. 2 1
817 160.54 atmosphere 1010.0 30 < th dose independent rect. 2 1
819 160.54 radiation 1.0 30 < th dose independent rect. 2 1
824 160.54 precipitation 0.1 30 < th dose independent rect. 2 1
828 160.54 atmosphere 1015.0 270 < th dose independent rect. 1 20
829 160.54 temperature 10.0 30 > th dose independent rect. 3 23
830 160.54 radiation 1.0 30 < th dose dependent rect. 2 1
835 160.54 precipitation 0.1 30 < th dose dependent rect. 2 1
848 160.56 temperature 15.0 30 > th dose independent rect. 23 4
863 160.57 temperature 25.0 1440 < th dose dependent rect. 21 1
869 160.58 precipitation 0.1 90 < th dose independent rect. 23 4
876 160.58 humidity 50.0 270 > th dose independent rect. 1 20
877 160.58 humidity 50.0 10 > th dose independent rect. 3 20
880 160.58 precipitation 0.1 90 < th dose dependent rect. 23 4
910 160.60 atmosphere 1015.0 30 < th dose dependent rect. 2 1
911 160.60 temperature 10.0 30 > th dose dependent rect. 1 8
912 160.60 temperature 10.0 720 > th dose dependent rect. 3 10
916 160.61 temperature 20.0 720 > th dose independent rect. 1 4
945 160.63 temperature 15.0 30 > th dose independent rect. 9 18
954 160.64 temperature 30.0 90 < th dose independent rect. 23 4
955 160.64 humidity 50.0 90 > th dose independent rect. 23 4
959 160.64 radiation 1.0 90 < th dose independent rect. 23 4
965 160.64 temperature 10.0 90 > th dose independent rect. 3 20
968 160.64 radiation 1.0 90 < th dose dependent rect. 23 4