Os02g0616100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0616100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 160.06 | 0.594 | 4.27 | -0.582 | 0.151 | 1.77 | -0.161 | -0.412 | -0.328 | 9.95 | 25.2 | 849 | -- | -- |
| 160.24 | 0.59 | 4.28 | -0.648 | 0.153 | 1.81 | -0.243 | -- | -0.345 | 9.92 | 25.07 | 857 | -- | -- |
| 160.14 | 0.589 | 4.27 | -0.569 | 0.154 | 1.76 | -- | -0.517 | -0.323 | 9.67 | 25.22 | 857 | -- | -- |
| 160.47 | 0.59 | 4.28 | -0.659 | 0.159 | 1.81 | -- | -- | -0.347 | 9.63 | 25.01 | 860 | -- | -- |
| 161.16 | 0.591 | 4.26 | -0.533 | -- | 1.82 | -- | -0.608 | -0.293 | -- | 25.71 | 832 | -- | -- |
| 207.91 | 0.676 | 4.36 | -1.17 | 0.404 | -- | -0.328 | -- | -0.724 | 10.6 | -- | -- | -- | -- |
| 208.35 | 0.676 | 4.36 | -1.18 | 0.406 | -- | -- | -- | -0.725 | 10.5 | -- | -- | -- | -- |
| 161.62 | 0.592 | 4.28 | -0.643 | -- | 1.88 | -- | -- | -0.32 | -- | 25.51 | 834 | -- | -- |
| 170.56 | 0.608 | 4.28 | -- | 0.176 | 1.77 | -- | -- | -0.303 | 9.8 | 25.49 | 2351 | -- | -- |
| 218.48 | 0.691 | 4.37 | -1.19 | -- | -- | -- | -- | -0.727 | -- | -- | -- | -- | -- |
| 244.97 | 0.732 | 4.33 | -- | 0.414 | -- | -- | -- | -0.594 | 10.7 | -- | -- | -- | -- |
| 171.53 | 0.61 | 4.28 | -- | -- | 2.11 | -- | -- | -0.254 | -- | 25.49 | 858 | -- | -- |
| 255.58 | 0.746 | 4.34 | -- | -- | -- | -- | -- | -0.595 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 156.82 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 15 |
| 2 | 156.94 | temperature | 20 | 720 | > th | dose dependent | sin | 9 | NA |
| 17 | 159.10 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 18 | 159.16 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 12 |
| 22 | 159.22 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 26 | 159.36 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 15 |
| 34 | 159.52 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 22 |
| 56 | 159.96 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 19 |
| 70 | 160.18 | temperature | 20 | 1440 | > th | dose dependent | sin | 12 | NA |
| 73 | 160.18 | temperature | 25 | 720 | < th | dose dependent | rect. | 14 | 20 |
| 102 | 160.43 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 5 |
| 126 | 160.58 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 127 | 160.58 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 2 |
| 146 | 160.66 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 158 | 160.70 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 194 | 160.89 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 261 | 161.19 | temperature | 10 | 720 | > th | dose dependent | sin | 10 | NA |
| 265 | 161.20 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 13 |
| 272 | 161.22 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |
| 317 | 161.37 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 327 | 161.41 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 348 | 161.48 | temperature | 30 | 720 | < th | dose dependent | sin | 10 | NA |
| 392 | 161.60 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 456 | 161.77 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 460 | 161.78 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 474 | 161.81 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 538 | 161.97 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 554 | 162.01 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 555 | 162.01 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 556 | 162.01 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 8 |
| 663 | 162.19 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 681 | 162.23 | radiation | 1 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 684 | 162.23 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 11 |
| 698 | 162.26 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 733 | 162.36 | radiation | 30 | 43200 | < th | dose independent | rect. | 22 | 9 |
| 750 | 162.39 | humidity | 90 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 779 | 162.43 | radiation | 40 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 785 | 162.43 | radiation | 1 | 4320 | < th | dose dependent | rect. | 17 | 7 |
| 791 | 162.44 | radiation | 1 | 4320 | < th | dose dependent | rect. | 17 | 9 |
| 792 | 162.45 | radiation | 1 | 4320 | < th | dose dependent | rect. | 17 | 3 |
| 801 | 162.47 | radiation | 30 | 43200 | < th | dose independent | rect. | 2 | 5 |
| 804 | 162.47 | radiation | 1 | 4320 | < th | dose dependent | rect. | 17 | 5 |
| 868 | 162.60 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 2 |
| 957 | 162.76 | wind | 1 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 963 | 162.77 | radiation | 30 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 980 | 162.81 | wind | 5 | 43200 | > th | dose dependent | rect. | 14 | 2 |
| 986 | 162.82 | radiation | 40 | 43200 | < th | dose independent | rect. | 9 | 1 |