Os02g0615800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0615800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein kinase-like domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 107.45 | 0.487 | 14.3 | 0.529 | 0.462 | 1.16 | 0.525 | -1.96 | -11.3 | 20.1 | 18.04 | 11213 | -- | -- |
| 105.27 | 0.478 | 14.2 | 0.413 | 0.457 | 1.57 | 0.501 | -- | -11.3 | 20.3 | 12.1 | 26334 | -- | -- |
| 105 | 0.477 | 14.3 | 0.162 | 0.45 | 1.34 | -- | -1.42 | -11.4 | 20.1 | 15.92 | 26261 | -- | -- |
| 105.65 | 0.479 | 14.2 | -0.241 | 0.457 | 1.99 | -- | -- | -11.5 | 20 | 7.156 | 47520 | -- | -- |
| 114.22 | 0.498 | 14.4 | -0.412 | -- | 1.38 | -- | -2.76 | -11.7 | -- | 17.59 | 47520 | -- | -- |
| 144.13 | 0.563 | 14.1 | 1.85 | 0.468 | -- | 0.575 | -- | -10.7 | 20.6 | -- | -- | -- | -- |
| 145.18 | 0.564 | 14.1 | 1.83 | 0.469 | -- | -- | -- | -10.7 | 20.4 | -- | -- | -- | -- |
| 117.09 | 0.504 | 14.2 | -0.263 | -- | 2.01 | -- | -- | -11.5 | -- | 5.527 | 47520 | -- | -- |
| 106.05 | 0.48 | 14.2 | -- | 0.459 | 1.82 | -- | -- | -11.4 | 20.1 | 5.235 | 47520 | -- | -- |
| 157.43 | 0.586 | 14 | 1.83 | -- | -- | -- | -- | -10.7 | -- | -- | -- | -- | -- |
| 233.86 | 0.715 | 14.1 | -- | 0.462 | -- | -- | -- | -10.9 | 20.7 | -- | -- | -- | -- |
| 117.57 | 0.505 | 14.2 | -- | -- | 1.82 | -- | -- | -11.4 | -- | 3.391 | 47520 | -- | -- |
| 245.94 | 0.732 | 14.1 | -- | -- | -- | -- | -- | -10.9 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 99.93 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 2 | 100.05 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 4 | 100.43 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 11 | 3 |
| 11 | 100.66 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 11 | 3 |
| 20 | 100.82 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 27 | 100.92 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 1 | 5 |
| 35 | 100.98 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 1 | 5 |
| 36 | 100.98 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 1 | 5 |
| 68 | 101.24 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 1 | 5 |
| 73 | 101.26 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 24 | 7 |
| 75 | 101.27 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 24 | 7 |
| 80 | 101.31 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 24 | 7 |
| 81 | 101.31 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 24 | 7 |
| 198 | 101.69 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 24 | 11 |
| 202 | 101.70 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 220 | 101.73 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 223 | 101.74 | temperature | 25.0 | 43200 | < th | dose independent | sin | 1 | NA |
| 236 | 101.75 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 24 | 10 |
| 240 | 101.75 | temperature | 20.0 | 43200 | > th | dose dependent | sin | 1 | NA |
| 241 | 101.75 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 24 | 10 |
| 244 | 101.76 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 2 | 3 |
| 245 | 101.76 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 24 | 10 |
| 297 | 101.83 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 298 | 101.83 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 2 | 3 |
| 303 | 101.83 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 9 | 2 |
| 304 | 101.83 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 2 | 3 |
| 328 | 101.87 | temperature | 25.0 | 43200 | > th | dose independent | sin | 1 | NA |
| 329 | 101.87 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 333 | 101.87 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 9 | 2 |
| 495 | 102.08 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 9 | 17 |
| 613 | 102.17 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 9 | 17 |
| 655 | 102.20 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 830 | 102.31 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 982 | 102.39 | temperature | 20.0 | 43200 | > th | dose dependent | no | NA | NA |