Os02g0615400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os02g0615400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 206.99 | 0.676 | 3.44 | 1.52 | 1.25 | -0.669 | 0.527 | 7.6 | 0.385 | 15.7 | 25.27 | 249 | -- | -- |
| 217.24 | 0.686 | 3.55 | 0.54 | 1.04 | 0.548 | 1.49 | -- | 0.165 | 15.7 | 30.87 | 239 | -- | -- |
| 207.64 | 0.671 | 3.44 | 1.59 | 1.25 | -0.692 | -- | 8.16 | 0.407 | 15.6 | 25.22 | 221 | -- | -- |
| 221.94 | 0.694 | 3.54 | 0.551 | 1.02 | 0.771 | -- | -- | 0.192 | 15.3 | 30.9 | 231 | -- | -- |
| 261.91 | 0.754 | 3.49 | 1.31 | -- | 0.574 | -- | 5.71 | 0.244 | -- | 24.2 | 187 | -- | -- |
| 221.82 | 0.698 | 3.56 | 0.587 | 1.14 | -- | 1.55 | -- | 0.146 | 15.7 | -- | -- | -- | -- |
| 228.96 | 0.709 | 3.55 | 0.611 | 1.15 | -- | -- | -- | 0.155 | 15.6 | -- | -- | -- | -- |
| 273.35 | 0.77 | 3.54 | 0.455 | -- | 1.32 | -- | -- | 0.175 | -- | 28.65 | 178 | -- | -- |
| 229.84 | 0.706 | 3.55 | -- | 0.995 | 0.848 | -- | -- | 0.136 | 15.3 | 30.8 | 239 | -- | -- |
| 302.06 | 0.812 | 3.55 | 0.563 | -- | -- | -- | -- | 0.124 | -- | -- | -- | -- | -- |
| 238.8 | 0.723 | 3.57 | -- | 1.13 | -- | -- | -- | 0.0867 | 15.6 | -- | -- | -- | -- |
| 278.46 | 0.777 | 3.55 | -- | -- | 1.36 | -- | -- | 0.121 | -- | 28.45 | 178 | -- | -- |
| 310.41 | 0.822 | 3.57 | -- | -- | -- | -- | -- | 0.0618 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 205.88 | temperature | 25 | 90 | > th | dose dependent | rect. | 7 | 12 |
| 3 | 206.05 | temperature | 25 | 270 | > th | dose dependent | rect. | 21 | 20 |
| 24 | 206.55 | temperature | 25 | 90 | > th | dose dependent | sin | 19 | NA |
| 48 | 206.84 | temperature | 25 | 270 | > th | dose dependent | sin | 23 | NA |
| 60 | 206.90 | temperature | 25 | 90 | > th | dose dependent | rect. | 7 | 20 |
| 73 | 206.94 | temperature | 25 | 90 | > th | dose dependent | rect. | 7 | 17 |
| 86 | 207.00 | temperature | 25 | 90 | > th | dose dependent | rect. | 7 | 15 |
| 116 | 207.18 | temperature | 30 | 30 | < th | dose independent | rect. | 16 | 19 |
| 157 | 207.31 | temperature | 25 | 270 | > th | dose dependent | no | NA | NA |
| 190 | 207.50 | temperature | 30 | 30 | > th | dose independent | sin | 13 | NA |
| 225 | 207.68 | temperature | 25 | 90 | > th | dose dependent | rect. | 14 | 23 |
| 226 | 207.69 | temperature | 25 | 30 | > th | dose dependent | rect. | 15 | 4 |
| 238 | 207.78 | humidity | 60 | 90 | > th | dose independent | rect. | 7 | 13 |
| 248 | 207.79 | temperature | 25 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 315 | 208.09 | temperature | 25 | 10 | > th | dose independent | rect. | 20 | 11 |
| 332 | 208.22 | radiation | 1 | 90 | > th | dose independent | rect. | 11 | 20 |
| 369 | 208.44 | temperature | 25 | 720 | > th | dose independent | rect. | 7 | 4 |
| 371 | 208.46 | temperature | 20 | 720 | > th | dose dependent | rect. | 8 | 1 |
| 405 | 208.75 | radiation | 40 | 30 | < th | dose dependent | rect. | 20 | 23 |
| 411 | 208.82 | temperature | 20 | 720 | > th | dose dependent | rect. | 5 | 8 |
| 416 | 208.88 | temperature | 25 | 270 | > th | dose dependent | rect. | 14 | 1 |
| 432 | 208.95 | temperature | 25 | 720 | < th | dose independent | rect. | 7 | 5 |
| 439 | 208.98 | temperature | 25 | 10 | > th | dose dependent | rect. | 4 | 3 |
| 466 | 209.07 | temperature | 30 | 30 | < th | dose independent | rect. | 16 | 4 |
| 484 | 209.17 | temperature | 20 | 720 | > th | dose dependent | rect. | 5 | 6 |
| 489 | 209.19 | temperature | 25 | 720 | > th | dose independent | rect. | 8 | 1 |
| 495 | 209.20 | temperature | 30 | 30 | < th | dose independent | rect. | 18 | 17 |
| 497 | 209.22 | temperature | 25 | 720 | < th | dose independent | rect. | 6 | 7 |
| 513 | 209.27 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 5 |
| 528 | 209.32 | temperature | 30 | 30 | > th | dose independent | rect. | 12 | 7 |
| 545 | 209.33 | temperature | 10 | 1440 | > th | dose independent | rect. | 12 | 7 |
| 549 | 209.33 | temperature | 10 | 1440 | > th | dose independent | rect. | 19 | 17 |
| 552 | 209.33 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 19 | 17 |
| 566 | 209.37 | temperature | 25 | 10 | > th | dose independent | rect. | 15 | 16 |
| 574 | 209.40 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 2 |
| 602 | 209.56 | humidity | 70 | 10 | < th | dose independent | rect. | 15 | 4 |
| 604 | 209.57 | temperature | 25 | 10 | > th | dose independent | rect. | 15 | 4 |
| 608 | 209.59 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 5 |
| 688 | 209.81 | temperature | 25 | 10 | > th | dose dependent | rect. | 20 | 11 |
| 696 | 209.87 | humidity | 60 | 270 | < th | dose independent | rect. | 14 | 1 |
| 697 | 209.88 | radiation | 20 | 30 | < th | dose independent | rect. | 20 | 23 |
| 734 | 209.99 | temperature | 30 | 30 | < th | dose independent | rect. | 16 | 12 |
| 836 | 210.18 | temperature | 30 | 30 | < th | dose independent | rect. | 7 | 13 |
| 859 | 210.25 | temperature | 30 | 30 | < th | dose independent | rect. | 14 | 21 |
| 864 | 210.26 | temperature | 25 | 30 | > th | dose independent | rect. | 4 | 3 |
| 934 | 210.36 | temperature | 30 | 30 | < th | dose independent | sin | 13 | NA |
| 945 | 210.39 | radiation | 10 | 30 | < th | dose independent | rect. | 6 | 1 |
| 967 | 210.42 | temperature | 10 | 30 | > th | dose dependent | rect. | 20 | 11 |
| 975 | 210.44 | atmosphere | 1010 | 30 | < th | dose independent | rect. | 6 | 1 |
| 980 | 210.46 | temperature | 30 | 30 | < th | dose independent | rect. | 18 | 2 |
| 999 | 210.54 | wind | 1 | 30 | > th | dose dependent | rect. | 6 | 1 |