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Os02g0615300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein kinase-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.36 (0.0626) R2 : 0.8
β1 : 5.34 (0.375) R2dD : 0.323 R2D : 0.644
β2 : 0.624 (0.138) R2dC : 0.00877 R2C : 0.000412
β3 : 2.57 (0.272) R2dE : 0.165 R2E : 0.458
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.243 (0.179) R2dN8 : 0.00217 R2N8 : -0.0043
σ : 1.02
deviance : 480.68
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C
peak time of C : 15.5
E
wheather : temperature
threshold : 20.69
memory length : 43593
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 20.6
open length of G : 11.6

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
465.76 1.01 8.44 4.53 0.772 3.38 0.118 -20.3 0.245 15.2 25.58 4351 19 13.1
480.38 1.02 8.37 5.3 0.642 2.58 0.34 -- -0.26 15.5 20.7 43524 19.9 13.7
465.65 1.01 8.45 4.51 0.769 3.38 -- -20.4 0.242 15.2 25.56 4350 19 13.1
480.68 1.02 8.36 5.34 0.624 2.57 -- -- -0.243 15.5 20.69 43593 20.6 11.6
497.32 1.04 8.45 4.5 -- 3.22 -- -20.1 0.232 -- 25.63 4349 18.9 13.4
557.87 1.11 8.06 8.32 0.518 -- 0.695 -- 1.07 15.4 -- -- -- --
559.32 1.11 8.05 8.33 0.526 -- -- -- 1.08 15.6 -- -- -- --
496.97 1.04 8.3 5.53 -- 2.29 -- -- -0.029 -- 19.4 47520 23.6 6.62
590.76 1.13 8.63 -- 0.621 6.24 -- -- -1.53 15.5 18.6 47520 21.1 4.7
574.66 1.12 8.05 8.31 -- -- -- -- 1.06 -- -- -- -- --
2389.83 2.29 8.26 -- 0.362 -- -- -- 0.148 15.8 -- -- -- --
609.48 1.15 8.64 -- -- 6.1 -- -- -1.56 -- 18.51 47520 21.9 4
2397.06 2.29 8.26 -- -- -- -- -- 0.14 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 441.84 wind 1 43200 < th dose dependent rect. 17 13
6 445.61 radiation 30 43200 > th dose dependent rect. 15 2
24 446.18 radiation 40 43200 > th dose dependent rect. 14 18
56 446.86 wind 1 43200 < th dose independent rect. 22 5
57 446.93 wind 1 43200 < th dose dependent rect. 22 6
65 448.63 wind 1 43200 < th dose dependent sin 12 NA
73 450.05 humidity 70 43200 < th dose independent rect. 7 1
79 451.54 wind 1 43200 < th dose independent rect. 20 8
96 451.89 humidity 60 43200 < th dose independent rect. 2 9
97 451.98 humidity 60 43200 < th dose independent rect. 4 7
103 452.27 humidity 70 43200 < th dose independent rect. 5 3
106 452.37 humidity 60 43200 < th dose independent rect. 8 3
119 453.39 wind 1 43200 < th dose independent rect. 18 10
123 453.45 radiation 20 43200 < th dose dependent rect. 17 12
129 453.71 radiation 40 43200 < th dose independent rect. 15 13
132 453.80 radiation 40 43200 < th dose independent rect. 15 2
133 453.81 radiation 40 43200 < th dose independent rect. 15 11
137 453.84 radiation 40 43200 < th dose independent rect. 15 4
148 453.93 radiation 40 43200 < th dose independent rect. 15 7
151 453.95 humidity 60 43200 < th dose dependent rect. 10 1
152 453.95 radiation 40 43200 < th dose dependent rect. 17 9
153 453.96 radiation 20 43200 < th dose dependent rect. 17 9
159 454.01 radiation 20 43200 < th dose dependent rect. 17 2
182 454.16 radiation 10 43200 < th dose independent rect. 5 1
186 454.24 radiation 1 43200 > th dose dependent rect. 17 2
197 454.26 radiation 10 43200 < th dose independent rect. 21 9
203 454.31 radiation 10 43200 < th dose independent rect. 23 7
216 454.38 wind 9 43200 > th dose dependent rect. 14 3
222 454.52 wind 9 43200 > th dose independent rect. 14 3
223 454.55 humidity 70 43200 < th dose dependent rect. 6 3
226 454.82 humidity 60 43200 > th dose independent rect. 6 4
235 455.03 humidity 60 43200 > th dose independent rect. 2 8
240 455.11 humidity 70 43200 > th dose independent rect. 7 1
285 455.88 humidity 60 43200 > th dose independent rect. 9 1
286 455.90 wind 9 43200 > th dose independent rect. 11 7
313 456.57 wind 1 43200 < th dose independent rect. 22 1
319 456.75 wind 9 43200 < th dose independent rect. 11 7
323 457.01 wind 9 43200 < th dose independent rect. 14 3
325 457.05 wind 1 43200 > th dose independent rect. 22 6
333 457.39 wind 1 43200 > th dose independent rect. 18 11
358 457.78 wind 1 14400 < th dose dependent rect. 1 2
402 458.49 wind 1 43200 > th dose independent rect. 20 8
447 459.20 wind 9 43200 > th dose independent rect. 11 1
449 459.27 wind 9 43200 < th dose independent rect. 11 1
605 460.96 radiation 1 43200 > th dose independent rect. 4 1
615 460.96 radiation 1 43200 > th dose dependent rect. 4 1
629 461.09 radiation 1 14400 < th dose independent rect. 9 1
658 461.36 radiation 40 43200 < th dose dependent rect. 21 8
690 461.50 radiation 1 14400 > th dose independent rect. 9 1
698 461.66 wind 9 43200 > th dose dependent rect. 11 1
717 461.97 wind 1 43200 > th dose independent rect. 22 1
724 462.12 radiation 1 43200 < th dose dependent rect. 7 2
746 462.41 temperature 20 14400 < th dose dependent rect. 6 2
748 462.43 radiation 10 43200 < th dose dependent rect. 3 2
750 462.43 humidity 60 43200 < th dose dependent rect. 17 20
774 462.69 wind 9 43200 > th dose dependent rect. 11 8
784 462.89 humidity 60 43200 < th dose dependent sin 7 NA
785 462.90 radiation 1 43200 > th dose independent rect. 7 4
788 462.96 radiation 1 43200 < th dose independent rect. 7 4
792 463.07 wind 9 43200 > th dose independent rect. 11 11
815 463.57 temperature 20 14400 < th dose dependent rect. 5 7
816 463.58 wind 1 43200 < th dose dependent rect. 20 1
833 463.84 wind 1 43200 < th dose dependent rect. 22 1
865 464.15 wind 7 43200 > th dose dependent rect. 11 6
909 464.65 radiation 10 43200 < th dose dependent sin 12 NA
945 465.24 humidity 90 43200 > th dose dependent rect. 2 1