Os02g0614200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0614200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53.31 | 0.343 | 13.8 | 0.926 | 1.03 | -0.801 | 0.562 | 1.3 | -0.141 | 17.5 | 27.91 | 1146 | -- | -- |
| 53.07 | 0.339 | 13.8 | 0.679 | 1.01 | -0.637 | 0.533 | -- | -0.261 | 17.3 | 30.8 | 1115 | -- | -- |
| 53.97 | 0.342 | 13.8 | 0.907 | 1.02 | -0.782 | -- | 1.29 | -0.169 | 17.4 | 28.4 | 1166 | -- | -- |
| 53.7 | 0.341 | 13.8 | 0.637 | 1.02 | -0.626 | -- | -- | -0.254 | 17.4 | 30.95 | 1116 | -- | -- |
| 105.33 | 0.478 | 13.7 | 1.09 | -- | -0.929 | -- | 1.44 | 0.0163 | -- | 24 | 1251 | -- | -- |
| 71.11 | 0.395 | 13.8 | 0.485 | 1.06 | -- | 0.595 | -- | -0.142 | 17.1 | -- | -- | -- | -- |
| 72 | 0.397 | 13.8 | 0.486 | 1.06 | -- | -- | -- | -0.139 | 17 | -- | -- | -- | -- |
| 105.6 | 0.479 | 13.8 | 0.746 | -- | -0.872 | -- | -- | 0.000924 | -- | 23.89 | 1246 | -- | -- |
| 64.11 | 0.373 | 13.9 | -- | 1.02 | -0.551 | -- | -- | -0.308 | 17.3 | 30.7 | 1114 | -- | -- |
| 131.02 | 0.535 | 13.8 | 0.448 | -- | -- | -- | -- | -0.166 | -- | -- | -- | -- | -- |
| 78.22 | 0.414 | 13.8 | -- | 1.05 | -- | -- | -- | -0.193 | 17 | -- | -- | -- | -- |
| 116.9 | 0.504 | 13.8 | -- | -- | -0.617 | -- | -- | -0.343 | -- | 31.1 | 1173 | -- | -- |
| 136.31 | 0.545 | 13.8 | -- | -- | -- | -- | -- | -0.216 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 51.47 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 14 | 16 |
| 13 | 52.92 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 1 | 5 |
| 22 | 53.23 | temperature | 30.0 | 720 | < th | dose independent | rect. | 16 | 9 |
| 27 | 53.45 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 2 | 3 |
| 35 | 53.63 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 24 | 7 |
| 37 | 53.64 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 14 | 17 |
| 45 | 53.77 | wind | 5.0 | 10 | < th | dose dependent | rect. | 3 | 6 |
| 51 | 53.97 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 57 | 54.01 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 17 | 5 |
| 61 | 54.02 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 17 | 15 |
| 66 | 54.13 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 102 | 54.44 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 17 | 12 |
| 121 | 54.56 | temperature | 20.0 | 720 | > th | dose dependent | sin | 15 | NA |
| 124 | 54.61 | temperature | 30.0 | 720 | < th | dose independent | rect. | 16 | 3 |
| 126 | 54.63 | temperature | 30.0 | 720 | < th | dose independent | rect. | 16 | 17 |
| 127 | 54.63 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 17 | 7 |
| 130 | 54.65 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 19 | 8 |
| 135 | 54.69 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 139 | 54.70 | temperature | 30.0 | 720 | > th | dose independent | rect. | 17 | 2 |
| 154 | 54.71 | wind | 5.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 159 | 54.72 | temperature | 10.0 | 720 | > th | dose dependent | sin | 15 | NA |
| 168 | 54.75 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 17 | 8 |
| 186 | 54.80 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 3 | 5 |
| 190 | 54.81 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 17 | 10 |
| 198 | 54.87 | wind | 7.0 | 270 | < th | dose dependent | rect. | 2 | 3 |
| 222 | 54.96 | temperature | 20.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 231 | 55.00 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 12 | 7 |
| 232 | 55.00 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 12 | 14 |
| 287 | 55.12 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 16 |
| 291 | 55.12 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 305 | 55.15 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 21 |
| 313 | 55.17 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 317 | 55.18 | radiation | 1.0 | 270 | < th | dose independent | rect. | 5 | 21 |
| 332 | 55.21 | temperature | 30.0 | 720 | < th | dose independent | rect. | 16 | 15 |
| 360 | 55.26 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 374 | 55.29 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 12 | 2 |
| 381 | 55.30 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 15 | 10 |
| 383 | 55.31 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 15 |
| 392 | 55.31 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 15 |
| 408 | 55.34 | wind | 3.0 | 10 | < th | dose independent | rect. | 3 | 6 |
| 412 | 55.34 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 12 | 5 |
| 448 | 55.41 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 472 | 55.45 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 3 |
| 483 | 55.48 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 3 |
| 486 | 55.48 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 3 |
| 489 | 55.49 | temperature | 20.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 512 | 55.52 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 8 | 17 |
| 515 | 55.53 | radiation | 1.0 | 270 | < th | dose independent | rect. | 9 | 16 |
| 519 | 55.53 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 544 | 55.55 | radiation | 1.0 | 270 | < th | dose independent | rect. | 15 | 10 |
| 545 | 55.55 | radiation | 1.0 | 270 | < th | dose independent | rect. | 13 | 12 |
| 547 | 55.55 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 551 | 55.55 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 15 | 10 |
| 553 | 55.55 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 13 | 12 |
| 576 | 55.57 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 17 | 14 |
| 581 | 55.58 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 686 | 55.71 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 3 |
| 758 | 55.83 | wind | 7.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 767 | 55.83 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 10 | 14 |
| 770 | 55.84 | temperature | 15.0 | 270 | > th | dose independent | rect. | 14 | 15 |
| 802 | 55.88 | radiation | 1.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 855 | 55.91 | humidity | 70.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 875 | 55.94 | humidity | 70.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 891 | 55.96 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 3 |
| 893 | 55.96 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 894 | 55.96 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 3 |
| 897 | 55.96 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 3 |
| 898 | 55.96 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 900 | 55.96 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 907 | 55.96 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 21 |
| 914 | 55.97 | radiation | 1.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 917 | 55.97 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 2 | 3 |
| 930 | 55.99 | temperature | 10.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 931 | 55.99 | temperature | 30.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 932 | 55.99 | humidity | 50.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 935 | 55.99 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 940 | 55.99 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 941 | 55.99 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 945 | 55.99 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 957 | 56.00 | wind | 9.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 958 | 56.00 | temperature | 20.0 | 10 | > th | dose independent | rect. | 3 | 17 |
| 959 | 56.00 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 21 |
| 965 | 56.01 | temperature | 30.0 | 720 | < th | dose dependent | sin | 16 | NA |
| 967 | 56.01 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 11 | 9 |
| 973 | 56.02 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 19 | 8 |
| 979 | 56.03 | temperature | 25.0 | 1440 | > th | dose dependent | no | NA | NA |
| 988 | 56.03 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 6 | 23 |
| 989 | 56.03 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 21 | 23 |