Os02g0612700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : BTB domain containing protein.
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Os02g0612700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : BTB domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 157.96 | 0.591 | 6.23 | 2.85 | 3.57 | -4.99 | -4.75 | 7.81 | 0.375 | 8.2 | 9.222 | 301 | 0.0412 | -- |
| 176.63 | 0.619 | 6.29 | 2.11 | 3.78 | -5.05 | 0.339 | -- | 0.262 | 8.02 | 9.038 | 355 | 0.643 | -- |
| 176.77 | 0.619 | 6.31 | 2.48 | 3.68 | -5.03 | -- | 2.73 | 0.294 | 8.38 | 6.904 | 321 | 0.0747 | -- |
| 176.84 | 0.619 | 6.3 | 2.16 | 3.46 | -4.8 | -- | -- | 0.24 | 8.15 | 9.868 | 339 | 0.406 | -- |
| 204.18 | 0.666 | 6.34 | 2.35 | -- | -2.4 | -- | 1.74 | 0.37 | -- | 22.39 | 466 | 1.3 | -- |
| 283.18 | 0.789 | 6.52 | 1.48 | 0.681 | -- | -0.87 | -- | -0.247 | 1.32 | -- | -- | -- | -- |
| 286.19 | 0.792 | 6.51 | 1.51 | 0.681 | -- | -- | -- | -0.242 | 1.09 | -- | -- | -- | -- |
| 203.99 | 0.665 | 6.42 | 1.92 | -- | -2.13 | -- | -- | 0.142 | -- | 20.85 | 463 | 0.0725 | -- |
| 284.19 | 0.785 | 6.38 | -- | 3.41 | -4.47 | -- | -- | -0.123 | 8.25 | 5.13 | 313 | 9.91e-07 | -- |
| 314.98 | 0.829 | 6.5 | 1.54 | -- | -- | -- | -- | -0.228 | -- | -- | -- | -- | -- |
| 346.56 | 0.871 | 6.55 | -- | 0.706 | -- | -- | -- | -0.41 | 1.17 | -- | -- | -- | -- |
| 298.79 | 0.805 | 6.48 | -- | -- | -1.76 | -- | -- | -0.114 | -- | 21.14 | 408 | 2.88e-07 | -- |
| 377.49 | 0.907 | 6.54 | -- | -- | -- | -- | -- | -0.399 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 158.69 | temperature | 10 | 270 | > th | dose dependent | sin | 6 | NA |
| 5 | 162.10 | temperature | 30 | 270 | < th | dose dependent | sin | 6 | NA |
| 15 | 167.95 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 22 | 171.66 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 36 | 174.55 | temperature | 25 | 270 | < th | dose dependent | rect. | 1 | 20 |
| 50 | 176.28 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 22 |
| 54 | 176.68 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 58 | 176.82 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 18 |
| 70 | 177.13 | temperature | 25 | 270 | < th | dose dependent | rect. | 3 | 17 |
| 75 | 177.37 | temperature | 15 | 270 | > th | dose dependent | rect. | 23 | 15 |
| 97 | 178.18 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 10 |
| 105 | 178.53 | temperature | 15 | 90 | > th | dose dependent | no | NA | NA |
| 155 | 180.36 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 12 |
| 159 | 180.55 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 167 | 180.70 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 170 | 180.70 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 181 | 180.85 | temperature | 30 | 10 | < th | dose dependent | rect. | 14 | 23 |
| 214 | 181.61 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 305 | 183.03 | temperature | 15 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 417 | 184.77 | temperature | 15 | 90 | > th | dose dependent | rect. | 8 | 23 |
| 437 | 185.07 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 445 | 185.16 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 467 | 185.42 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 553 | 186.51 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 562 | 186.65 | temperature | 15 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 564 | 186.71 | temperature | 10 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 577 | 186.93 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 601 | 187.34 | temperature | 30 | 1440 | < th | dose dependent | rect. | 10 | 1 |
| 603 | 187.35 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 646 | 187.89 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 651 | 187.95 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 709 | 188.80 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 17 |
| 778 | 189.64 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 19 |
| 803 | 189.96 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 816 | 190.10 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 831 | 190.23 | temperature | 30 | 1440 | < th | dose dependent | rect. | 8 | 4 |
| 960 | 191.67 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 988 | 191.96 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |