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Os02g0612600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.37 (0.032) R2 : 0.362
β1 : -0.692 (0.117) R2dD : 0.0506 R2D : 0.0061
β2 : 1.09 (0.0764) R2dC : 0.288 R2C : 0.263
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.411 (0.0684) R2dN8 : 0.0678 R2N8 : 0.0283
σ : 0.602
deviance : 165.47
__
_____
C
peak time of C : 0.997
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
144.62 0.565 7.35 -0.708 0.366 1.03 -0.833 -0.804 -0.382 6.86 10.69 10 -- --
145.44 0.566 7.36 -0.703 0.383 0.827 -1.06 -- -0.398 4.04 10.69 10 -- --
146.07 0.563 7.35 -0.721 0.382 1.06 -- -0.594 -0.393 7.35 10.7 8 -- --
147.77 0.566 7.35 -0.696 0.375 1.04 -- -- -0.388 7.11 10.58 6 -- --
152.4 0.575 7.36 -0.701 -- 0.964 -- -0.57 -0.386 -- 11.74 8 -- --
162.75 0.598 7.38 -0.722 1.09 -- -0.811 -- -0.416 1.06 -- -- -- --
165.47 0.602 7.37 -0.692 1.09 -- -- -- -0.411 0.997 -- -- -- --
154.3 0.579 7.36 -0.686 -- 0.958 -- -- -0.384 -- 11.64 8 -- --
160.5 0.59 7.33 -- 0.359 1.04 -- -- -0.315 7.2 11.09 6 -- --
239.93 0.724 7.36 -0.651 -- -- -- -- -0.39 -- -- -- -- --
178.1 0.624 7.36 -- 1.08 -- -- -- -0.334 0.97 -- -- -- --
166.22 0.6 7.34 -- -- 0.958 -- -- -0.313 -- 12.4 6 -- --
251.12 0.74 7.34 -- -- -- -- -- -0.318 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 130.84 radiation 10.0 10 < th dose dependent rect. 3 13
2 131.22 radiation 10.0 10 < th dose dependent rect. 3 17
3 131.28 radiation 10.0 10 < th dose dependent rect. 3 7
11 132.33 radiation 10.0 10 < th dose dependent sin 2 NA
13 132.73 wind 1.0 270 > th dose independent rect. 24 18
14 132.77 humidity 80.0 30 > th dose independent rect. 20 7
19 133.33 wind 1.0 270 > th dose independent rect. 24 5
20 133.50 temperature 30.0 270 < th dose independent rect. 5 19
25 133.71 wind 1.0 30 > th dose independent rect. 3 17
30 133.82 atmosphere 995.0 30 > th dose dependent rect. 20 7
31 133.83 radiation 10.0 10 < th dose dependent rect. 1 19
33 133.86 humidity 70.0 270 > th dose independent rect. 17 7
36 133.98 humidity 50.0 270 > th dose independent rect. 5 19
43 134.26 wind 9.0 30 < th dose independent rect. 3 17
53 134.87 temperature 30.0 270 < th dose independent rect. 17 7
59 135.20 temperature 10.0 30 > th dose dependent rect. 20 7
60 135.22 humidity 50.0 270 > th dose independent rect. 4 21
64 135.31 atmosphere 1000.0 30 > th dose independent rect. 20 7
72 135.45 precipitation 0.1 10 < th dose independent rect. 20 7
73 135.45 precipitation 0.1 10 < th dose dependent rect. 20 7
74 135.45 radiation 30.0 10 < th dose dependent rect. 1 10
79 135.56 temperature 10.0 10 > th dose independent rect. 20 7
81 135.56 temperature 30.0 10 < th dose independent rect. 20 7
83 135.56 humidity 50.0 10 > th dose independent rect. 20 7
91 135.56 radiation 1.0 10 < th dose independent rect. 20 7
101 135.56 temperature 10.0 10 > th dose independent rect. 3 17
105 135.56 atmosphere 1015.0 10 < th dose independent rect. 3 17
107 135.56 radiation 1.0 10 < th dose dependent rect. 20 7
118 135.58 wind 9.0 10 < th dose independent rect. 20 7
123 135.61 radiation 30.0 10 < th dose dependent rect. 1 8
124 135.70 radiation 1.0 90 < th dose dependent sin 2 NA
135 135.95 wind 7.0 270 < th dose independent rect. 24 18
139 136.04 humidity 80.0 30 > th dose independent rect. 20 5
142 136.12 precipitation 0.1 10 < th dose independent rect. 3 17
143 136.12 precipitation 0.1 10 < th dose dependent rect. 3 17
147 136.19 radiation 1.0 90 > th dose independent sin 2 NA
148 136.20 radiation 1.0 270 < th dose independent rect. 24 6
153 136.25 wind 1.0 90 > th dose independent rect. 3 3
154 136.25 radiation 1.0 30 < th dose independent rect. 3 13
162 136.33 radiation 1.0 90 < th dose independent sin 2 NA
167 136.42 humidity 50.0 10 > th dose dependent rect. 20 7
172 136.53 radiation 1.0 270 < th dose dependent rect. 24 18
175 136.57 radiation 1.0 270 < th dose independent rect. 24 17
181 136.64 radiation 30.0 90 < th dose dependent rect. 1 8
189 136.70 radiation 20.0 14400 < th dose dependent rect. 21 7
196 136.78 wind 1.0 270 > th dose independent rect. 10 9
208 136.98 radiation 1.0 270 < th dose dependent rect. 24 6
210 137.00 wind 9.0 270 < th dose independent rect. 10 9
217 137.04 radiation 10.0 270 < th dose dependent rect. 17 7
220 137.09 wind 7.0 270 < th dose independent rect. 24 5
221 137.09 atmosphere 995.0 270 > th dose independent rect. 5 19
224 137.12 radiation 1.0 30 < th dose independent rect. 3 11
228 137.13 radiation 10.0 10 < th dose dependent rect. 1 15
229 137.13 temperature 10.0 270 > th dose dependent rect. 24 18
233 137.16 precipitation 0.1 270 < th dose independent rect. 5 19
234 137.16 precipitation 0.1 270 < th dose dependent rect. 5 19
241 137.21 atmosphere 1015.0 270 < th dose independent rect. 24 5
247 137.22 temperature 10.0 270 > th dose independent rect. 24 5
248 137.22 temperature 30.0 270 < th dose independent rect. 24 5
249 137.22 humidity 50.0 270 > th dose independent rect. 24 5
252 137.22 atmosphere 995.0 270 > th dose independent rect. 24 5
257 137.22 temperature 10.0 270 > th dose independent rect. 5 19
265 137.27 radiation 1.0 30 < th dose independent rect. 3 9
275 137.34 wind 7.0 270 < th dose independent rect. 23 20
282 137.38 radiation 1.0 30 < th dose independent rect. 3 17
283 137.39 radiation 1.0 30 < th dose independent rect. 3 5
285 137.39 radiation 1.0 270 < th dose independent rect. 18 6
290 137.42 wind 9.0 10 < th dose dependent rect. 20 7
298 137.50 wind 7.0 30 < th dose independent rect. 1 19
305 137.55 precipitation 0.1 270 < th dose independent rect. 24 5
309 137.55 precipitation 0.1 270 < th dose dependent rect. 24 5
332 137.69 temperature 10.0 30 > th dose dependent rect. 3 17
339 137.73 atmosphere 995.0 30 > th dose independent rect. 3 17
341 137.73 radiation 10.0 4320 < th dose dependent rect. 21 5
352 137.75 temperature 10.0 270 > th dose dependent rect. 20 3
357 137.76 radiation 10.0 10 < th dose dependent rect. 1 13
374 137.88 atmosphere 995.0 270 > th dose dependent rect. 17 7
380 137.92 humidity 70.0 10 > th dose independent rect. 18 9
381 137.92 temperature 30.0 270 < th dose dependent rect. 24 5
384 137.95 atmosphere 995.0 270 > th dose independent rect. 18 6
387 137.95 radiation 10.0 10 < th dose dependent rect. 1 21
398 138.02 temperature 10.0 270 > th dose dependent rect. 19 5
402 138.04 wind 1.0 270 > th dose independent rect. 12 17
423 138.17 temperature 30.0 270 < th dose independent rect. 19 15
434 138.21 atmosphere 1015.0 270 < th dose independent rect. 24 18
436 138.22 temperature 10.0 270 > th dose independent rect. 18 6
442 138.22 temperature 10.0 270 > th dose independent rect. 24 18
460 138.31 radiation 20.0 10 < th dose independent rect. 1 8
473 138.37 wind 9.0 270 < th dose independent rect. 18 6
479 138.40 temperature 10.0 1440 > th dose independent rect. 21 7
482 138.40 temperature 30.0 1440 < th dose independent rect. 21 7
486 138.40 humidity 50.0 1440 > th dose independent rect. 21 7
492 138.40 atmosphere 995.0 1440 > th dose independent rect. 21 7
493 138.40 radiation 1.0 1440 < th dose independent rect. 21 7
513 138.40 temperature 10.0 1440 > th dose independent rect. 4 17
520 138.42 precipitation 0.1 270 < th dose independent rect. 18 6
523 138.42 precipitation 0.1 270 < th dose dependent rect. 18 6
532 138.47 wind 1.0 270 > th dose independent rect. 19 4
533 138.47 radiation 20.0 10 < th dose independent rect. 3 6
546 138.51 wind 1.0 270 > th dose independent rect. 18 6
547 138.51 precipitation 0.1 270 < th dose independent rect. 19 15
548 138.51 precipitation 0.1 270 < th dose dependent rect. 19 15
562 138.58 temperature 10.0 270 > th dose independent rect. 10 9
563 138.58 atmosphere 1015.0 270 < th dose independent rect. 10 9
564 138.58 temperature 10.0 270 > th dose independent rect. 19 15
565 138.58 atmosphere 995.0 270 > th dose independent rect. 19 15
582 138.64 humidity 50.0 270 > th dose independent rect. 19 15
583 138.64 wind 9.0 270 < th dose independent rect. 13 16
588 138.66 temperature 30.0 270 < th dose dependent rect. 1 3
590 138.68 wind 9.0 270 < th dose independent rect. 21 23
609 138.77 atmosphere 1000.0 270 > th dose independent rect. 19 4
626 138.83 wind 9.0 270 < th dose independent rect. 19 15
631 138.84 precipitation 0.1 270 < th dose independent rect. 4 21
633 138.84 precipitation 0.1 270 < th dose dependent rect. 4 21
640 138.87 wind 7.0 270 < th dose independent rect. 1 3
649 138.91 wind 5.0 10 < th dose independent rect. 20 5
660 139.00 radiation 20.0 90 < th dose independent rect. 1 8
672 139.02 wind 7.0 270 < th dose independent rect. 23 7
680 139.06 temperature 10.0 270 > th dose independent rect. 1 3
682 139.06 temperature 30.0 270 < th dose independent rect. 1 3
683 139.06 humidity 50.0 270 > th dose independent rect. 1 3
686 139.06 atmosphere 995.0 270 > th dose independent rect. 1 3
687 139.06 atmosphere 1010.0 270 < th dose independent rect. 1 3
689 139.06 radiation 1.0 270 < th dose independent rect. 1 3
695 139.06 atmosphere 1015.0 270 < th dose independent rect. 23 20
696 139.06 temperature 10.0 270 > th dose independent rect. 4 21
698 139.06 radiation 1.0 270 < th dose dependent rect. 1 3
707 139.08 precipitation 0.1 270 < th dose independent rect. 24 18
708 139.08 precipitation 0.1 270 < th dose dependent rect. 24 18
715 139.11 temperature 10.0 270 > th dose dependent rect. 10 9
718 139.12 temperature 10.0 270 > th dose independent rect. 19 4
720 139.12 humidity 50.0 270 > th dose independent rect. 19 4
722 139.12 radiation 1.0 270 < th dose independent rect. 19 4
728 139.12 temperature 10.0 270 > th dose independent rect. 23 20
729 139.12 atmosphere 995.0 270 > th dose independent rect. 4 21
731 139.12 radiation 1.0 270 < th dose dependent rect. 19 4
741 139.15 precipitation 0.1 270 < th dose independent rect. 10 9
743 139.15 precipitation 0.1 270 < th dose dependent rect. 10 9
748 139.17 precipitation 0.1 270 < th dose independent rect. 20 3
760 139.17 precipitation 0.1 270 < th dose dependent rect. 20 3
761 139.17 humidity 50.0 270 > th dose dependent rect. 24 5
773 139.20 humidity 50.0 270 > th dose dependent rect. 17 7
831 139.29 precipitation 0.1 270 < th dose independent rect. 1 3
832 139.29 wind 9.0 270 < th dose independent rect. 19 4
845 139.29 precipitation 0.1 270 < th dose dependent rect. 1 3
892 139.43 wind 9.0 270 < th dose independent rect. 5 19
916 139.52 precipitation 0.1 30 < th dose independent rect. 20 5
918 139.52 precipitation 0.1 30 < th dose dependent rect. 20 5
921 139.54 temperature 10.0 1440 > th dose independent rect. 21 5
924 139.54 temperature 30.0 1440 < th dose independent rect. 21 5
928 139.54 humidity 50.0 1440 > th dose independent rect. 21 5
934 139.54 atmosphere 1000.0 30 > th dose independent rect. 20 5
935 139.54 atmosphere 995.0 1440 > th dose independent rect. 21 5
936 139.54 radiation 1.0 1440 < th dose independent rect. 21 5
957 139.54 temperature 10.0 1440 > th dose independent rect. 2 19