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Os02g0612200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.61 (0.0382) R2 : 0.71
β1 : 4.42 (0.141) R2dD : 0.67 R2D : 0.493
β2 : -- (--) R2dC : -- R2C : --
β3 : 0.752 (0.13) R2dE : 0.0438 R2E : -0.0361
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.16 (0.0826) R2dN8 : 0.19 R2N8 : 0.0205
σ : 0.681
deviance : 212.06
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_____
C
peak time of C : --
E
wheather : humidity
threshold : 73.11
memory length : 1616
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
197.88 0.661 8.58 4.52 0.756 0.905 -0.597 -0.298 1.27 1.62 71 1520 -- --
198.05 0.655 8.59 4.48 0.755 0.894 -0.626 -- 1.26 1.61 71.45 1519 -- --
199.26 0.657 8.58 4.55 0.751 0.926 -- -0.399 1.28 1.58 71.07 1519 -- --
199.43 0.658 8.59 4.48 0.747 0.897 -- -- 1.24 1.55 72 1523 -- --
210.07 0.679 8.6 4.44 -- 0.757 -- -0.586 1.17 -- 73.23 1628 -- --
224.32 0.702 8.62 4.3 0.834 -- -0.83 -- 1.13 1.71 -- -- -- --
227.03 0.706 8.62 4.33 0.833 -- -- -- 1.13 1.65 -- -- -- --
212.06 0.681 8.61 4.42 -- 0.752 -- -- 1.16 -- 73.11 1616 -- --
648.08 1.19 8.73 -- 0.918 1.96 -- -- 0.671 2.03 64.33 11563 -- --
269.36 0.767 8.61 4.36 -- -- -- -- 1.15 -- -- -- -- --
721.22 1.26 8.73 -- 0.912 -- -- -- 0.652 1.79 -- -- -- --
375.24 0.902 8.76 -- -- 3.95 -- -- 0.483 -- 64.11 47520 -- --
771.68 1.3 8.72 -- -- -- -- -- 0.669 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 189.17 wind 1.0 14400 < th dose independent rect. 2 3
2 189.63 wind 1.0 14400 > th dose independent rect. 2 3
3 189.97 humidity 70.0 90 > th dose dependent rect. 5 15
13 191.91 wind 1.0 14400 < th dose dependent rect. 2 3
18 192.57 humidity 80.0 30 > th dose independent rect. 5 15
21 192.62 radiation 20.0 90 < th dose dependent rect. 5 12
48 194.79 wind 1.0 43200 < th dose independent rect. 2 7
49 194.81 humidity 80.0 43200 < th dose independent rect. 6 2
75 195.94 wind 7.0 43200 < th dose dependent rect. 7 1
76 195.98 wind 1.0 43200 > th dose independent rect. 1 8
77 195.99 temperature 25.0 4320 < th dose independent rect. 5 1
78 196.02 radiation 30.0 30 < th dose dependent rect. 5 9
87 196.17 radiation 10.0 90 < th dose independent rect. 5 12
104 196.53 wind 1.0 43200 < th dose dependent rect. 2 7
115 196.73 radiation 40.0 270 < th dose dependent rect. 10 21
130 197.08 wind 1.0 43200 > th dose dependent rect. 7 1
135 197.22 precipitation 0.1 14400 > th dose dependent rect. 13 1
139 197.27 humidity 70.0 1440 > th dose independent rect. 11 2
144 197.40 humidity 80.0 43200 > th dose independent rect. 6 1
150 197.46 precipitation 0.1 14400 > th dose independent rect. 13 1
158 197.58 radiation 10.0 90 < th dose independent rect. 5 3
162 197.61 precipitation 0.1 14400 < th dose independent rect. 13 1
164 197.61 precipitation 0.1 14400 < th dose dependent rect. 13 1
169 197.71 humidity 70.0 1440 > th dose independent rect. 10 22
179 197.81 atmosphere 1000.0 270 > th dose independent rect. 11 21
180 197.83 wind 1.0 43200 < th dose dependent rect. 5 1
186 197.93 radiation 20.0 30 < th dose independent rect. 5 9
198 198.07 radiation 40.0 30 < th dose dependent rect. 5 15
209 198.22 humidity 70.0 1440 > th dose independent rect. 10 9
213 198.24 radiation 30.0 10 < th dose independent rect. 5 13
214 198.24 precipitation 0.1 90 < th dose independent rect. 7 22
215 198.24 precipitation 0.1 90 < th dose dependent rect. 7 22
220 198.25 humidity 70.0 90 > th dose dependent rect. 4 23
231 198.36 humidity 70.0 1440 > th dose independent rect. 10 11
246 198.40 radiation 30.0 10 < th dose independent rect. 5 15
274 198.53 radiation 20.0 90 < th dose dependent rect. 5 4
275 198.53 humidity 80.0 270 > th dose dependent rect. 2 21
277 198.55 humidity 70.0 1440 < th dose independent rect. 11 22
279 198.60 humidity 70.0 1440 < th dose independent rect. 11 7
282 198.60 humidity 60.0 270 > th dose dependent rect. 13 18
283 198.60 radiation 30.0 270 < th dose dependent rect. 13 18
284 198.61 temperature 25.0 4320 > th dose independent rect. 5 1
289 198.65 wind 1.0 43200 < th dose dependent rect. 2 11
293 198.69 precipitation 0.1 14400 < th dose independent rect. 12 4
295 198.69 precipitation 0.1 14400 < th dose dependent rect. 12 4
300 198.79 radiation 30.0 30 < th dose dependent rect. 5 7
303 198.81 radiation 30.0 90 < th dose dependent rect. 4 23
306 198.85 humidity 70.0 1440 < th dose independent rect. 11 2
311 198.87 humidity 70.0 1440 > th dose independent rect. 15 23
315 198.90 humidity 80.0 270 > th dose independent rect. 2 16
346 199.05 precipitation 0.1 14400 > th dose independent rect. 13 3
347 199.06 temperature 25.0 4320 > th dose independent rect. 4 3
349 199.06 atmosphere 1000.0 270 > th dose independent rect. 15 16
351 199.08 temperature 25.0 4320 < th dose independent rect. 4 3
367 199.18 humidity 70.0 1440 > th dose independent sin 21 NA
368 199.18 precipitation 0.1 43200 > th dose independent rect. 16 2
394 199.24 precipitation 0.1 43200 > th dose dependent rect. 16 4
410 199.31 precipitation 0.1 43200 < th dose independent rect. 16 2
411 199.31 precipitation 0.1 43200 < th dose dependent rect. 16 2
412 199.32 humidity 70.0 1440 > th dose independent rect. 5 14
424 199.36 humidity 70.0 1440 > th dose independent rect. 20 23
486 199.45 humidity 70.0 1440 > th dose independent no NA NA
549 199.57 wind 3.0 43200 < th dose independent rect. 7 1
555 199.58 atmosphere 1000.0 90 > th dose independent rect. 5 2
600 199.78 radiation 20.0 30 < th dose independent rect. 5 22
608 199.80 humidity 70.0 1440 < th dose independent rect. 15 2
632 199.85 radiation 10.0 270 < th dose independent rect. 3 14
635 199.87 wind 5.0 43200 < th dose dependent rect. 5 1
639 199.90 radiation 1.0 10 > th dose dependent rect. 7 12
659 199.93 humidity 70.0 90 > th dose dependent rect. 5 2
676 200.01 humidity 70.0 1440 < th dose independent sin 21 NA
698 200.05 humidity 70.0 1440 < th dose independent rect. 6 12
706 200.05 humidity 70.0 270 > th dose independent rect. 11 20
735 200.10 humidity 60.0 1440 > th dose dependent rect. 10 7
746 200.15 wind 7.0 43200 < th dose dependent rect. 5 4
750 200.16 radiation 10.0 270 < th dose independent rect. 13 18
751 200.16 radiation 30.0 270 < th dose independent rect. 11 20
756 200.17 humidity 70.0 270 > th dose independent rect. 13 18
759 200.18 humidity 70.0 1440 < th dose independent rect. 15 23
770 200.21 temperature 25.0 4320 > th dose dependent rect. 5 1
774 200.22 radiation 20.0 30 < th dose independent rect. 5 7
815 200.39 humidity 70.0 90 > th dose dependent rect. 5 4
818 200.40 humidity 80.0 90 > th dose independent rect. 5 2
819 200.40 radiation 40.0 10 < th dose dependent sin 23 NA
839 200.48 humidity 70.0 1440 < th dose independent no NA NA
920 200.54 humidity 80.0 90 > th dose independent rect. 5 4
924 200.54 humidity 70.0 90 > th dose dependent rect. 5 6
926 200.55 humidity 60.0 1440 > th dose dependent rect. 13 1
962 200.61 humidity 60.0 1440 > th dose dependent rect. 11 4
987 200.67 humidity 70.0 10 > th dose dependent sin 23 NA