Os02g0611800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Hydroxyanthranilate hydroxycinnamoyltransferase 3.
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Os02g0611800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Hydroxyanthranilate hydroxycinnamoyltransferase 3.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 113.85 | 0.501 | 11.4 | 0.702 | 0.873 | -1.5 | -0.0435 | 0.147 | 0.69 | 5.9 | 21 | 14 | -- | -- |
| 113.87 | 0.497 | 11.4 | 0.677 | 0.874 | -1.49 | -0.0735 | -- | 0.683 | 5.88 | 20.92 | 14 | -- | -- |
| 113.85 | 0.497 | 11.4 | 0.704 | 0.873 | -1.5 | -- | 0.16 | 0.692 | 5.92 | 20.96 | 13 | -- | -- |
| 113.87 | 0.497 | 11.4 | 0.677 | 0.875 | -1.49 | -- | -- | 0.683 | 5.91 | 20.92 | 13 | -- | -- |
| 136.34 | 0.544 | 11.4 | 0.97 | -- | -2.06 | -- | 1.33 | 0.782 | -- | 23.12 | 210 | -- | -- |
| 147.96 | 0.57 | 11.4 | 0.362 | 1.31 | -- | -0.0673 | -- | 0.428 | 4.6 | -- | -- | -- | -- |
| 147.97 | 0.57 | 11.4 | 0.363 | 1.31 | -- | -- | -- | 0.428 | 4.6 | -- | -- | -- | -- |
| 137.32 | 0.546 | 11.4 | 0.768 | -- | -1.94 | -- | -- | 0.717 | -- | 23.08 | 209 | -- | -- |
| 125.06 | 0.521 | 11.4 | -- | 0.943 | -1.26 | -- | -- | 0.574 | 5.61 | 21.1 | 11 | -- | -- |
| 239.18 | 0.723 | 11.4 | 0.413 | -- | -- | -- | -- | 0.463 | -- | -- | -- | -- | -- |
| 151.44 | 0.576 | 11.4 | -- | 1.32 | -- | -- | -- | 0.388 | 4.6 | -- | -- | -- | -- |
| 152.13 | 0.574 | 11.4 | -- | -- | -1.8 | -- | -- | 0.598 | -- | 23.5 | 211 | -- | -- |
| 243.68 | 0.729 | 11.5 | -- | -- | -- | -- | -- | 0.417 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 112.55 | temperature | 20 | 90 | > th | dose dependent | rect. | 8 | 19 |
| 2 | 112.57 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 22 |
| 3 | 112.58 | temperature | 20 | 10 | > th | dose dependent | sin | 18 | NA |
| 8 | 112.92 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 22 |
| 56 | 114.39 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 59 | 114.42 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 9 |
| 72 | 114.87 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 82 | 115.07 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 10 |
| 85 | 115.14 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 21 |
| 89 | 115.18 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 94 | 115.42 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 103 | 115.58 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 10 |
| 104 | 115.58 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 111 | 115.84 | temperature | 30 | 10 | < th | dose dependent | sin | 20 | NA |
| 138 | 116.25 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 167 | 116.63 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 175 | 116.78 | radiation | 1 | 720 | < th | dose independent | rect. | 14 | 17 |
| 188 | 116.99 | radiation | 1 | 720 | > th | dose independent | rect. | 13 | 17 |
| 189 | 117.00 | temperature | 20 | 90 | > th | dose dependent | rect. | 11 | 16 |
| 192 | 117.04 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 206 | 117.24 | temperature | 25 | 90 | < th | dose independent | rect. | 11 | 11 |
| 219 | 117.33 | temperature | 20 | 10 | > th | dose dependent | rect. | 2 | 23 |
| 226 | 117.44 | temperature | 30 | 10 | < th | dose dependent | rect. | 10 | 23 |
| 230 | 117.47 | radiation | 1 | 720 | < th | dose independent | rect. | 10 | 21 |
| 235 | 117.51 | radiation | 1 | 720 | > th | dose independent | rect. | 15 | 15 |
| 236 | 117.51 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 20 |
| 237 | 117.55 | radiation | 1 | 720 | < th | dose independent | sin | 13 | NA |
| 252 | 117.63 | temperature | 25 | 270 | < th | dose independent | rect. | 11 | 9 |
| 257 | 117.68 | radiation | 1 | 720 | > th | dose independent | sin | 13 | NA |
| 272 | 117.86 | temperature | 20 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 273 | 117.90 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 12 |
| 300 | 118.09 | temperature | 25 | 10 | < th | dose independent | sin | 20 | NA |
| 306 | 118.10 | temperature | 10 | 30 | > th | dose dependent | no | NA | NA |
| 335 | 118.29 | temperature | 25 | 90 | < th | dose independent | rect. | 11 | 21 |
| 348 | 118.37 | temperature | 20 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 352 | 118.44 | temperature | 20 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 358 | 118.51 | radiation | 1 | 720 | > th | dose independent | rect. | 7 | 23 |
| 362 | 118.54 | temperature | 25 | 720 | > th | dose independent | rect. | 6 | 13 |
| 377 | 118.63 | radiation | 1 | 720 | < th | dose independent | rect. | 5 | 17 |
| 392 | 118.71 | radiation | 1 | 720 | < th | dose dependent | rect. | 14 | 17 |
| 393 | 118.72 | temperature | 25 | 90 | > th | dose independent | sin | 19 | NA |
| 422 | 118.89 | radiation | 1 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 430 | 118.95 | temperature | 25 | 10 | < th | dose independent | rect. | 12 | 10 |
| 439 | 119.05 | temperature | 25 | 720 | < th | dose independent | rect. | 3 | 18 |
| 447 | 119.08 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 455 | 119.13 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 459 | 119.16 | temperature | 20 | 720 | > th | dose dependent | sin | 23 | NA |
| 465 | 119.19 | radiation | 1 | 720 | < th | dose dependent | rect. | 3 | 15 |
| 466 | 119.21 | radiation | 1 | 720 | < th | dose independent | rect. | 19 | 23 |
| 479 | 119.27 | temperature | 25 | 720 | < th | dose independent | rect. | 6 | 16 |
| 489 | 119.37 | radiation | 1 | 720 | < th | dose independent | rect. | 3 | 15 |
| 490 | 119.37 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 17 |
| 507 | 119.44 | radiation | 1 | 720 | < th | dose independent | rect. | 1 | 17 |
| 524 | 119.49 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 533 | 119.54 | temperature | 25 | 90 | < th | dose independent | sin | 20 | NA |
| 548 | 119.59 | radiation | 1 | 720 | < th | dose independent | rect. | 13 | 23 |
| 555 | 119.59 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 578 | 119.69 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 16 |
| 600 | 119.81 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 628 | 119.89 | radiation | 1 | 720 | < th | dose independent | no | NA | NA |
| 633 | 119.90 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 638 | 119.94 | radiation | 1 | 720 | < th | dose dependent | sin | 13 | NA |
| 654 | 119.98 | radiation | 1 | 720 | < th | dose dependent | sin | 0 | NA |
| 658 | 119.99 | temperature | 25 | 720 | > th | dose independent | sin | 23 | NA |
| 663 | 120.01 | radiation | 1 | 720 | < th | dose independent | rect. | 23 | 23 |
| 666 | 120.03 | temperature | 30 | 30 | < th | dose dependent | no | NA | NA |
| 669 | 120.04 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 11 |
| 685 | 120.08 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 692 | 120.12 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 14 |
| 713 | 120.18 | temperature | 25 | 270 | > th | dose independent | rect. | 9 | 17 |
| 721 | 120.20 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 17 |
| 725 | 120.21 | radiation | 1 | 720 | > th | dose independent | rect. | 11 | 23 |
| 727 | 120.22 | radiation | 1 | 720 | < th | dose independent | rect. | 14 | 8 |
| 736 | 120.25 | radiation | 1 | 720 | < th | dose independent | rect. | 1 | 22 |
| 755 | 120.34 | radiation | 1 | 720 | > th | dose independent | rect. | 5 | 14 |
| 769 | 120.35 | temperature | 25 | 1440 | < th | dose independent | rect. | 13 | 12 |
| 773 | 120.36 | radiation | 1 | 720 | > th | dose independent | no | NA | NA |
| 774 | 120.36 | temperature | 25 | 1440 | > th | dose independent | rect. | 13 | 12 |
| 824 | 120.37 | temperature | 25 | 1440 | > th | dose independent | sin | 18 | NA |
| 829 | 120.40 | temperature | 25 | 1440 | < th | dose independent | sin | 18 | NA |
| 830 | 120.40 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 6 |
| 832 | 120.40 | temperature | 20 | 720 | > th | dose dependent | rect. | 11 | 7 |
| 843 | 120.42 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 14 |
| 902 | 120.56 | temperature | 20 | 720 | > th | dose dependent | rect. | 13 | 5 |
| 909 | 120.58 | temperature | 25 | 720 | > th | dose dependent | rect. | 21 | 20 |
| 918 | 120.60 | radiation | 1 | 720 | > th | dose independent | rect. | 13 | 22 |
| 940 | 120.68 | radiation | 1 | 720 | < th | dose independent | sin | 0 | NA |
| 941 | 120.68 | radiation | 1 | 720 | > th | dose independent | rect. | 13 | 6 |
| 948 | 120.68 | radiation | 1 | 720 | < th | dose independent | rect. | 10 | 12 |