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Os02g0610800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF1092 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.8 (0.0143) R2 : 0.0102
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0655 (0.0301) R2dN8 : 0.0132 R2N8 : 0.0102
σ : 0.27
deviance : 33.37
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
27.77 0.248 13.8 -0.0787 0.311 -0.396 0.063 -0.00435 -0.072 0.402 16.68 15 -- --
27.66 0.245 13.8 -0.0792 0.314 -0.398 0.0683 -- -0.0687 0.414 16.5 12 -- --
27.68 0.245 13.8 -0.0816 0.316 -0.399 -- 0.0509 -0.0617 0.345 16.34 12 -- --
27.55 0.244 13.8 -0.0787 0.313 -0.396 -- -- -0.0635 0.427 16.12 9 -- --
30.12 0.256 13.8 -0.0449 -- -0.193 -- 0.0421 -0.0716 -- 17.76 11 -- --
33.1 0.27 13.8 -0.0583 0.0451 -- 0.157 -- -0.0717 8.84 -- -- -- --
33.14 0.27 13.8 -0.0519 0.0496 -- -- -- -0.071 11 -- -- -- --
30.08 0.255 13.8 -0.0604 -- -0.193 -- -- -0.0656 -- 16.63 9 -- --
27.71 0.245 13.8 -- 0.31 -0.391 -- -- -0.0565 0.437 16.12 9 -- --
33.29 0.27 13.8 -0.053 -- -- -- -- -0.0713 -- -- -- -- --
33.21 0.27 13.8 -- 0.05 -- -- -- -0.0652 11 -- -- -- --
30.16 0.256 13.8 -- -- -0.195 -- -- -0.0594 -- 18.05 9 -- --
33.37 0.27 13.8 -- -- -- -- -- -0.0655 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 25.37 atmosphere 1000.0 270 > th dose independent rect. 2 5
3 25.66 radiation 10.0 10 < th dose independent rect. 5 17
5 25.87 atmosphere 995.0 270 > th dose dependent rect. 2 5
6 25.91 temperature 25.0 270 < th dose independent rect. 1 6
10 26.00 radiation 10.0 270 < th dose independent rect. 2 5
11 26.00 wind 9.0 270 < th dose independent rect. 7 18
13 26.08 humidity 50.0 270 > th dose dependent rect. 2 5
21 26.11 radiation 20.0 10 < th dose dependent rect. 5 17
22 26.12 humidity 50.0 270 > th dose independent rect. 7 19
23 26.13 radiation 30.0 270 < th dose dependent rect. 2 5
30 26.18 humidity 70.0 270 > th dose independent rect. 1 6
36 26.21 temperature 10.0 270 > th dose independent rect. 1 6
39 26.21 humidity 50.0 270 > th dose independent rect. 1 6
42 26.21 atmosphere 1015.0 270 < th dose independent rect. 1 6
45 26.21 temperature 10.0 270 > th dose independent rect. 7 18
46 26.22 wind 9.0 270 < th dose independent rect. 1 6
60 26.23 atmosphere 995.0 270 > th dose dependent rect. 3 3
63 26.26 precipitation 0.1 270 < th dose independent rect. 7 18
66 26.26 precipitation 0.1 270 < th dose dependent rect. 7 18
71 26.29 precipitation 0.1 270 < th dose independent rect. 1 6
73 26.29 precipitation 0.1 270 < th dose dependent rect. 1 6
76 26.32 temperature 25.0 270 < th dose independent rect. 3 3
87 26.37 wind 1.0 270 > th dose independent rect. 2 5
90 26.38 atmosphere 1000.0 270 > th dose independent rect. 13 18
102 26.47 wind 7.0 270 < th dose independent rect. 7 7
104 26.47 radiation 1.0 270 > th dose independent rect. 7 7
107 26.47 radiation 10.0 270 < th dose dependent rect. 2 12
108 26.48 wind 1.0 270 > th dose independent rect. 7 19
113 26.50 temperature 10.0 270 > th dose dependent rect. 2 5
119 26.52 wind 9.0 270 < th dose independent rect. 6 21
127 26.56 temperature 10.0 270 > th dose independent rect. 7 7
128 26.56 atmosphere 995.0 270 > th dose independent rect. 7 7
129 26.56 atmosphere 1015.0 270 < th dose independent rect. 7 7
130 26.56 temperature 10.0 270 > th dose independent rect. 14 17
138 26.58 precipitation 0.1 270 < th dose independent rect. 7 7
140 26.58 radiation 40.0 14400 < th dose dependent rect. 23 6
141 26.58 precipitation 0.1 270 < th dose dependent rect. 7 7
142 26.59 radiation 40.0 270 < th dose independent rect. 13 18
169 26.69 radiation 1.0 270 < th dose dependent rect. 17 10
172 26.70 wind 7.0 270 < th dose independent rect. 19 7
184 26.72 radiation 1.0 90 > th dose independent rect. 16 15
194 26.74 radiation 1.0 90 < th dose dependent sin 12 NA
208 26.75 wind 9.0 270 < th dose independent rect. 14 17
216 26.76 radiation 10.0 10 < th dose independent rect. 5 14
232 26.78 atmosphere 1010.0 270 < th dose independent rect. 3 3
234 26.79 wind 9.0 270 < th dose independent rect. 3 3
235 26.79 temperature 10.0 270 > th dose independent rect. 3 3
238 26.79 humidity 50.0 270 > th dose independent rect. 3 3
248 26.79 temperature 10.0 270 > th dose independent rect. 6 21
255 26.80 wind 1.0 270 > th dose independent rect. 7 7
261 26.82 wind 1.0 90 > th dose independent rect. 7 22
278 26.85 temperature 10.0 270 > th dose dependent rect. 3 3
284 26.86 humidity 50.0 270 > th dose independent rect. 7 7
305 26.88 radiation 10.0 10 < th dose independent sin 23 NA
315 26.91 precipitation 0.1 270 < th dose independent rect. 3 3
317 26.91 precipitation 0.1 270 < th dose independent rect. 18 9
318 26.91 wind 7.0 270 < th dose independent rect. 21 15
320 26.91 atmosphere 1000.0 10 > th dose independent rect. 16 16
321 26.91 precipitation 0.1 270 < th dose independent rect. 6 21
322 26.91 precipitation 0.1 270 < th dose dependent rect. 3 3
324 26.91 precipitation 0.1 270 < th dose dependent rect. 18 9
325 26.91 precipitation 0.1 270 < th dose dependent rect. 6 21
326 26.92 atmosphere 995.0 270 > th dose independent rect. 2 17
336 26.95 precipitation 0.1 270 < th dose independent rect. 19 7
340 26.95 precipitation 0.1 270 < th dose dependent rect. 19 7
346 26.96 humidity 60.0 270 > th dose independent rect. 18 9
353 26.97 precipitation 0.1 270 < th dose independent rect. 14 17
357 26.97 precipitation 0.1 270 < th dose dependent rect. 14 17
360 26.98 radiation 1.0 270 < th dose independent rect. 18 9
374 27.01 humidity 90.0 270 > th dose independent rect. 3 2
376 27.01 radiation 10.0 270 < th dose dependent sin 4 NA
381 27.02 temperature 10.0 270 > th dose independent rect. 19 7
382 27.02 temperature 30.0 270 < th dose independent rect. 19 7
383 27.02 humidity 50.0 270 > th dose independent rect. 19 7
385 27.02 atmosphere 995.0 270 > th dose independent rect. 19 7
386 27.02 radiation 1.0 270 < th dose independent rect. 19 7
393 27.02 temperature 10.0 270 > th dose independent rect. 2 17
394 27.02 atmosphere 1015.0 270 < th dose independent rect. 2 17
406 27.03 radiation 1.0 10 < th dose dependent sin 11 NA
419 27.04 temperature 10.0 270 > th dose independent rect. 18 9
421 27.04 radiation 20.0 270 < th dose independent rect. 18 9
424 27.04 temperature 10.0 270 > th dose independent rect. 3 15
425 27.04 atmosphere 1015.0 270 < th dose independent rect. 3 15
447 27.06 radiation 20.0 90 < th dose independent rect. 15 18
469 27.08 precipitation 0.1 270 < th dose independent rect. 21 15
479 27.08 precipitation 0.1 270 < th dose dependent rect. 21 15
507 27.11 radiation 1.0 270 < th dose independent rect. 3 12
510 27.11 wind 9.0 270 < th dose dependent rect. 2 5
524 27.12 radiation 10.0 10 < th dose independent rect. 5 9
540 27.13 precipitation 0.1 270 < th dose independent rect. 2 17
545 27.13 precipitation 0.1 270 < th dose dependent rect. 2 17
547 27.14 atmosphere 1015.0 270 < th dose independent rect. 12 9
567 27.16 temperature 10.0 270 > th dose independent rect. 12 9
568 27.16 temperature 10.0 270 > th dose independent rect. 21 15
569 27.16 atmosphere 995.0 270 > th dose independent rect. 21 15
570 27.16 precipitation 0.1 270 < th dose independent rect. 3 15
571 27.16 radiation 10.0 270 < th dose independent rect. 2 16
572 27.16 precipitation 0.1 270 < th dose dependent rect. 3 15
573 27.16 radiation 1.0 270 < th dose dependent rect. 10 16
583 27.17 atmosphere 995.0 270 > th dose independent rect. 12 9
599 27.18 atmosphere 1015.0 270 < th dose independent rect. 14 17
622 27.21 radiation 20.0 10 < th dose dependent sin 23 NA
662 27.24 radiation 20.0 10 < th dose independent rect. 16 16
667 27.24 radiation 30.0 10 < th dose dependent rect. 5 5
671 27.25 temperature 20.0 270 > th dose independent rect. 12 8
673 27.25 atmosphere 995.0 90 > th dose dependent rect. 5 2
675 27.25 temperature 10.0 270 > th dose dependent rect. 19 7
683 27.26 wind 9.0 270 < th dose independent rect. 2 17
706 27.29 atmosphere 995.0 10 > th dose dependent rect. 5 3
721 27.31 wind 1.0 270 > th dose independent rect. 19 7
726 27.31 radiation 20.0 90 < th dose independent rect. 13 20
730 27.31 radiation 40.0 90 < th dose dependent rect. 15 18
731 27.32 temperature 20.0 90 > th dose independent rect. 5 2
734 27.32 radiation 10.0 10 < th dose independent rect. 5 5
740 27.32 atmosphere 995.0 270 > th dose independent rect. 7 18
744 27.33 radiation 1.0 90 > th dose independent sin 12 NA
756 27.34 radiation 1.0 90 < th dose independent sin 12 NA
759 27.34 precipitation 0.1 270 < th dose independent rect. 12 9
763 27.34 precipitation 0.1 270 < th dose dependent rect. 12 9
766 27.34 wind 9.0 270 < th dose dependent rect. 7 18
771 27.35 radiation 10.0 270 < th dose independent rect. 1 14
838 27.40 humidity 50.0 270 > th dose independent rect. 21 15
867 27.43 wind 1.0 270 > th dose independent rect. 12 9
872 27.44 atmosphere 1000.0 10 > th dose independent rect. 5 3
883 27.45 humidity 80.0 10 > th dose independent rect. 5 5
889 27.45 atmosphere 1000.0 10 > th dose independent rect. 5 17
895 27.45 temperature 10.0 90 > th dose dependent rect. 16 15
902 27.46 wind 9.0 270 < th dose independent rect. 12 9
906 27.46 atmosphere 1015.0 270 < th dose independent rect. 7 18
908 27.46 humidity 60.0 90 > th dose dependent rect. 5 2
916 27.47 humidity 90.0 90 < th dose independent rect. 7 8
924 27.47 radiation 40.0 90 < th dose dependent rect. 13 20
969 27.50 radiation 20.0 10 < th dose independent rect. 1 21
986 27.51 temperature 10.0 270 > th dose dependent rect. 13 18
991 27.52 radiation 10.0 90 < th dose independent rect. 5 13
992 27.52 radiation 1.0 10 > th dose independent rect. 17 14