Os02g0609500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os02g0609500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 332.23 | 0.856 | 3.34 | 1.64 | 0.541 | 0.0529 | -0.743 | -10.9 | 0.308 | 10.6 | 29.85 | 4393 | -- | -- |
| 358.04 | 0.881 | 3.78 | -1.72 | 0.487 | -1.6 | -0.675 | -- | -0.758 | 10.3 | 24 | 47520 | -- | -- |
| 334.48 | 0.852 | 3.33 | 1.63 | 0.545 | 0.0612 | -- | -11.1 | 0.309 | 10.7 | 29.85 | 4392 | -- | -- |
| 360.5 | 0.884 | 3.78 | -1.78 | 0.526 | -1.62 | -- | -- | -0.788 | 10.4 | 24 | 47520 | -- | -- |
| 352.74 | 0.875 | 3.35 | 1.62 | -- | 0.0979 | -- | -11 | 0.3 | -- | 29.85 | 4392 | -- | -- |
| 399.1 | 0.937 | 3.6 | -0.0245 | 0.49 | -- | -0.888 | -- | 0.0188 | 10 | -- | -- | -- | -- |
| 402.19 | 0.939 | 3.6 | -0.0591 | 0.494 | -- | -- | -- | 0.0169 | 10.1 | -- | -- | -- | -- |
| 377.38 | 0.905 | 3.79 | -1.74 | -- | -1.58 | -- | -- | -0.77 | -- | 23.94 | 47520 | -- | -- |
| 376.73 | 0.909 | 3.61 | -- | 0.525 | -0.686 | -- | -- | -0.00674 | 7 | 28.5 | 47520 | -- | -- |
| 416.91 | 0.954 | 3.62 | -0.0655 | -- | -- | -- | -- | 0.0163 | -- | -- | -- | -- | -- |
| 402.28 | 0.938 | 3.6 | -- | 0.494 | -- | -- | -- | 0.0235 | 10.1 | -- | -- | -- | -- |
| 390.63 | 0.924 | 3.62 | -- | -- | -0.596 | -- | -- | 0.0046 | -- | 28.5 | 47520 | -- | -- |
| 417.02 | 0.953 | 3.62 | -- | -- | -- | -- | -- | 0.0236 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 323.60 | temperature | 25 | 4320 | > th | dose dependent | rect. | 5 | 2 |
| 5 | 327.11 | temperature | 30 | 14400 | < th | dose independent | rect. | 5 | 4 |
| 8 | 327.37 | temperature | 30 | 14400 | < th | dose independent | rect. | 19 | 14 |
| 9 | 327.39 | temperature | 30 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 16 | 327.77 | temperature | 30 | 14400 | < th | dose independent | rect. | 23 | 10 |
| 18 | 327.78 | temperature | 30 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 22 | 328.65 | temperature | 25 | 4320 | > th | dose dependent | rect. | 24 | 8 |
| 25 | 328.89 | temperature | 30 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 66 | 330.79 | temperature | 30 | 4320 | < th | dose independent | rect. | 3 | 9 |
| 73 | 330.89 | temperature | 30 | 4320 | < th | dose independent | rect. | 20 | 16 |
| 75 | 330.92 | temperature | 30 | 4320 | < th | dose independent | rect. | 22 | 14 |
| 99 | 331.13 | temperature | 30 | 4320 | < th | dose independent | sin | 6 | NA |
| 103 | 331.17 | temperature | 30 | 4320 | < th | dose independent | rect. | 9 | 6 |
| 132 | 331.51 | temperature | 30 | 4320 | > th | dose independent | sin | 6 | NA |
| 141 | 331.57 | temperature | 30 | 4320 | < th | dose independent | rect. | 4 | 11 |
| 146 | 331.58 | temperature | 30 | 4320 | < th | dose independent | rect. | 1 | 14 |
| 153 | 331.61 | temperature | 30 | 4320 | < th | dose independent | rect. | 20 | 19 |
| 316 | 332.55 | temperature | 30 | 4320 | < th | dose independent | rect. | 17 | 22 |
| 375 | 332.90 | temperature | 30 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 393 | 332.99 | temperature | 30 | 4320 | < th | dose independent | rect. | 9 | 22 |
| 394 | 333.00 | temperature | 30 | 4320 | < th | dose independent | rect. | 9 | 12 |
| 409 | 333.03 | temperature | 25 | 4320 | > th | dose dependent | rect. | 22 | 3 |
| 410 | 333.03 | temperature | 25 | 4320 | > th | dose dependent | rect. | 21 | 5 |
| 433 | 333.09 | temperature | 30 | 4320 | < th | dose independent | rect. | 15 | 23 |
| 435 | 333.11 | temperature | 30 | 4320 | < th | dose independent | rect. | 13 | 23 |
| 443 | 333.24 | temperature | 30 | 4320 | < th | dose independent | rect. | 4 | 17 |
| 454 | 333.25 | temperature | 30 | 4320 | < th | dose independent | rect. | 15 | 21 |
| 455 | 333.25 | temperature | 30 | 4320 | < th | dose independent | rect. | 1 | 22 |
| 478 | 333.28 | temperature | 30 | 4320 | < th | dose independent | no | NA | NA |
| 537 | 333.31 | temperature | 30 | 4320 | > th | dose independent | rect. | 15 | 23 |
| 568 | 333.50 | temperature | 30 | 4320 | < th | dose independent | rect. | 13 | 2 |
| 633 | 333.72 | temperature | 30 | 4320 | > th | dose independent | rect. | 15 | 21 |
| 636 | 333.73 | temperature | 30 | 4320 | > th | dose independent | rect. | 13 | 23 |
| 644 | 333.78 | temperature | 30 | 4320 | > th | dose independent | no | NA | NA |
| 773 | 334.14 | temperature | 30 | 4320 | > th | dose independent | rect. | 13 | 2 |
| 794 | 334.22 | temperature | 25 | 4320 | > th | dose dependent | sin | 10 | NA |