Os02g0608500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ankyrin-kinase protein (Fragment).
FiT-DB / Search/ Help/ Sample detail
|
Os02g0608500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Ankyrin-kinase protein (Fragment).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67.43 | 0.386 | 9.65 | -0.989 | 0.162 | -0.782 | -0.884 | -0.31 | -0.442 | 9.44 | 66.45 | 1335 | -- | -- |
| 67.53 | 0.383 | 9.65 | -0.984 | 0.16 | -0.808 | -0.885 | -- | -0.44 | 9.3 | 66.27 | 1328 | -- | -- |
| 70.1 | 0.39 | 9.64 | -0.989 | 0.18 | -0.827 | -- | -0.0464 | -0.44 | 10.7 | 63.84 | 1342 | -- | -- |
| 70.08 | 0.39 | 9.64 | -0.996 | 0.179 | -0.827 | -- | -- | -0.448 | 10.8 | 64.08 | 1359 | -- | -- |
| 70.6 | 0.391 | 9.62 | -0.996 | -- | -0.853 | -- | 0.362 | -0.34 | -- | 79.42 | 1057 | -- | -- |
| 81.52 | 0.423 | 9.61 | -1.13 | 0.224 | -- | -0.663 | -- | -0.311 | 10.3 | -- | -- | -- | -- |
| 82.97 | 0.427 | 9.61 | -1.15 | 0.235 | -- | -- | -- | -0.31 | 11.6 | -- | -- | -- | -- |
| 70.72 | 0.392 | 9.63 | -1.01 | -- | -0.811 | -- | -- | -0.349 | -- | 77.84 | 1126 | -- | -- |
| 94.52 | 0.453 | 9.62 | -- | 0.171 | -1.39 | -- | -- | -0.347 | 10 | 57.15 | 1406 | -- | -- |
| 86.43 | 0.434 | 9.62 | -1.16 | -- | -- | -- | -- | -0.313 | -- | -- | -- | -- | -- |
| 117.97 | 0.508 | 9.58 | -- | 0.249 | -- | -- | -- | -0.182 | 11.9 | -- | -- | -- | -- |
| 96.1 | 0.457 | 9.63 | -- | -- | -1.45 | -- | -- | -0.355 | -- | 57 | 1402 | -- | -- |
| 121.87 | 0.515 | 9.59 | -- | -- | -- | -- | -- | -0.185 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 62.88 | wind | 9 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 2 | 63.10 | wind | 9 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 3 | 63.37 | wind | 9 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 6 | 63.70 | radiation | 40 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 7 | 63.76 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 2 |
| 8 | 63.85 | radiation | 40 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 11 | 63.93 | radiation | 30 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 26 | 64.39 | radiation | 40 | 43200 | < th | dose independent | rect. | 1 | 11 |
| 31 | 64.40 | humidity | 80 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 45 | 64.43 | wind | 9 | 14400 | < th | dose independent | rect. | 17 | 22 |
| 120 | 64.84 | wind | 7 | 14400 | > th | dose dependent | rect. | 18 | 21 |
| 142 | 64.90 | radiation | 20 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 218 | 64.95 | radiation | 40 | 43200 | < th | dose independent | sin | 9 | NA |
| 225 | 64.99 | wind | 7 | 43200 | > th | dose independent | rect. | 12 | 5 |
| 247 | 65.06 | wind | 7 | 43200 | < th | dose independent | rect. | 12 | 5 |
| 248 | 65.07 | wind | 9 | 14400 | < th | dose independent | rect. | 20 | 19 |
| 278 | 65.14 | radiation | 40 | 43200 | > th | dose dependent | sin | 10 | NA |
| 284 | 65.16 | humidity | 70 | 1440 | < th | dose dependent | rect. | 17 | 18 |
| 292 | 65.18 | wind | 1 | 43200 | < th | dose dependent | rect. | 8 | 3 |
| 294 | 65.19 | wind | 7 | 43200 | > th | dose dependent | rect. | 13 | 6 |
| 315 | 65.21 | wind | 7 | 14400 | > th | dose independent | rect. | 20 | 20 |
| 352 | 65.30 | wind | 1 | 43200 | < th | dose dependent | rect. | 21 | 7 |
| 354 | 65.31 | wind | 9 | 14400 | > th | dose independent | rect. | 17 | 22 |
| 386 | 65.36 | wind | 9 | 14400 | < th | dose independent | rect. | 20 | 17 |
| 397 | 65.37 | wind | 7 | 14400 | > th | dose dependent | rect. | 3 | 18 |
| 404 | 65.41 | wind | 7 | 14400 | > th | dose independent | sin | 1 | NA |
| 410 | 65.42 | wind | 7 | 14400 | > th | dose independent | rect. | 3 | 13 |
| 424 | 65.43 | wind | 9 | 14400 | > th | dose independent | rect. | 18 | 19 |
| 441 | 65.47 | wind | 7 | 14400 | > th | dose dependent | rect. | 10 | 11 |
| 445 | 65.49 | radiation | 40 | 43200 | > th | dose independent | sin | 10 | NA |
| 454 | 65.52 | radiation | 1 | 720 | > th | dose independent | sin | 14 | NA |
| 464 | 65.55 | wind | 7 | 14400 | > th | dose independent | rect. | 3 | 18 |
| 470 | 65.57 | wind | 7 | 14400 | < th | dose independent | sin | 1 | NA |
| 471 | 65.57 | radiation | 20 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 498 | 65.59 | humidity | 80 | 14400 | > th | dose independent | rect. | 22 | 2 |
| 508 | 65.60 | wind | 7 | 14400 | < th | dose independent | rect. | 3 | 13 |
| 531 | 65.62 | wind | 7 | 14400 | > th | dose independent | rect. | 10 | 6 |
| 559 | 65.63 | radiation | 40 | 43200 | < th | dose independent | rect. | 9 | 23 |
| 565 | 65.64 | wind | 9 | 14400 | > th | dose independent | rect. | 20 | 17 |
| 566 | 65.64 | wind | 7 | 14400 | < th | dose independent | rect. | 3 | 18 |
| 567 | 65.64 | humidity | 60 | 1440 | > th | dose independent | rect. | 16 | 20 |
| 571 | 65.65 | radiation | 40 | 43200 | < th | dose independent | no | NA | NA |
| 574 | 65.65 | radiation | 40 | 43200 | < th | dose independent | rect. | 7 | 11 |
| 578 | 65.65 | radiation | 40 | 43200 | < th | dose independent | rect. | 3 | 14 |
| 604 | 65.65 | humidity | 60 | 1440 | < th | dose independent | rect. | 16 | 20 |
| 614 | 65.65 | radiation | 40 | 43200 | < th | dose independent | rect. | 7 | 21 |
| 739 | 65.68 | radiation | 40 | 43200 | < th | dose independent | rect. | 9 | 8 |
| 788 | 65.69 | wind | 7 | 14400 | < th | dose independent | rect. | 3 | 16 |
| 840 | 65.73 | temperature | 30 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 942 | 65.78 | humidity | 70 | 1440 | < th | dose dependent | sin | 10 | NA |
| 970 | 65.81 | wind | 7 | 14400 | > th | dose dependent | rect. | 10 | 21 |
| 986 | 65.84 | wind | 7 | 14400 | > th | dose independent | rect. | 10 | 11 |