Os02g0608400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : EF-Hand type domain containing protein.
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Os02g0608400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : EF-Hand type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.7 | 0.219 | 11.4 | 0.495 | 0.491 | -0.312 | -0.127 | 0.0662 | 0.318 | 18.1 | 16.14 | 1272 | -- | -- |
| 21.71 | 0.217 | 11.4 | 0.488 | 0.491 | -0.307 | -0.124 | -- | 0.314 | 18 | 16.42 | 1271 | -- | -- |
| 21.74 | 0.217 | 11.4 | 0.495 | 0.491 | -0.311 | -- | 0.0594 | 0.317 | 18 | 16.35 | 1271 | -- | -- |
| 21.75 | 0.217 | 11.4 | 0.488 | 0.49 | -0.308 | -- | -- | 0.313 | 18 | 16.63 | 1271 | -- | -- |
| 33.85 | 0.271 | 11.4 | 0.501 | -- | -0.315 | -- | 0.000934 | 0.31 | -- | 19.38 | 1319 | -- | -- |
| 25.27 | 0.236 | 11.5 | 0.438 | 0.489 | -- | -0.0889 | -- | 0.245 | 17.5 | -- | -- | -- | -- |
| 25.29 | 0.236 | 11.5 | 0.439 | 0.489 | -- | -- | -- | 0.245 | 17.5 | -- | -- | -- | -- |
| 33.82 | 0.271 | 11.4 | 0.475 | -- | -0.307 | -- | -- | 0.306 | -- | 18.68 | 1332 | -- | -- |
| 27.96 | 0.246 | 11.4 | -- | 0.486 | -0.262 | -- | -- | 0.251 | 18 | 17.17 | 1272 | -- | -- |
| 37.71 | 0.287 | 11.4 | 0.422 | -- | -- | -- | -- | 0.233 | -- | -- | -- | -- | -- |
| 30.36 | 0.258 | 11.5 | -- | 0.481 | -- | -- | -- | 0.196 | 17.5 | -- | -- | -- | -- |
| 39.54 | 0.293 | 11.4 | -- | -- | -0.278 | -- | -- | 0.258 | -- | 35.68 | 1306 | -- | -- |
| 42.41 | 0.304 | 11.5 | -- | -- | -- | -- | -- | 0.186 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.25 | wind | 7.0 | 90 | < th | dose independent | rect. | 7 | 20 |
| 2 | 21.26 | wind | 7.0 | 270 | < th | dose independent | rect. | 5 | 21 |
| 3 | 21.34 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 4 | 21.35 | wind | 3.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 5 | 21.36 | wind | 7.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 6 | 21.36 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 21 |
| 7 | 21.37 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 7 | 20 |
| 8 | 21.38 | wind | 9.0 | 90 | < th | dose dependent | rect. | 7 | 20 |
| 9 | 21.40 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 23 |
| 10 | 21.44 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 3 | 5 |
| 15 | 21.51 | wind | 7.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 19 | 21.53 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 8 |
| 20 | 21.54 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 22 | 21.55 | wind | 7.0 | 90 | < th | dose independent | rect. | 7 | 9 |
| 27 | 21.57 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 5 | 21 |
| 32 | 21.60 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 2 | 3 |
| 36 | 21.62 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 4 |
| 38 | 21.62 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 39 | 21.64 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 44 | 21.65 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 1 | 5 |
| 46 | 21.66 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 14 | 3 |
| 53 | 21.68 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 10 | 5 |
| 59 | 21.69 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 1 |
| 62 | 21.69 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 1 |
| 75 | 21.72 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 24 | 7 |
| 83 | 21.73 | temperature | 15.0 | 90 | > th | dose independent | rect. | 16 | 15 |
| 85 | 21.73 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 10 | 4 |
| 86 | 21.73 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 13 | 14 |
| 91 | 21.74 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 9 | 16 |
| 98 | 21.74 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 19 | 8 |
| 102 | 21.75 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 7 | 9 |
| 113 | 21.76 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 15 |
| 115 | 21.76 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 15 |
| 127 | 21.78 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 129 | 21.78 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 130 | 21.78 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 132 | 21.78 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 133 | 21.78 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 134 | 21.78 | radiation | 30.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 145 | 21.78 | temperature | 10.0 | 90 | > th | dose independent | rect. | 7 | 20 |
| 150 | 21.79 | temperature | 15.0 | 90 | > th | dose independent | rect. | 7 | 9 |
| 167 | 21.82 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 172 | 21.83 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 180 | 21.84 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 7 | 20 |
| 185 | 21.84 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 7 | 20 |
| 188 | 21.85 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 196 | 21.86 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 7 | 9 |
| 204 | 21.86 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 7 | 9 |
| 208 | 21.87 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 3 | 5 |
| 210 | 21.87 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 7 | 9 |
| 212 | 21.87 | radiation | 40.0 | 90 | < th | dose independent | rect. | 16 | 15 |
| 214 | 21.87 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 2 | 3 |
| 220 | 21.88 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 3 | 4 |
| 225 | 21.89 | radiation | 20.0 | 1440 | < th | dose independent | sin | 20 | NA |
| 242 | 21.89 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 21 |
| 245 | 21.89 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 2 | 3 |
| 256 | 21.90 | radiation | 1.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 264 | 21.90 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 8 |
| 265 | 21.90 | wind | 9.0 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 273 | 21.91 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 16 | 15 |
| 309 | 21.92 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 7 | 20 |
| 324 | 21.93 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 325 | 21.93 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 327 | 21.93 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 16 |
| 336 | 21.93 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 10 | 15 |
| 343 | 21.94 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 3 |
| 349 | 21.94 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 9 |
| 364 | 21.94 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 9 |
| 401 | 21.96 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 16 | 15 |
| 435 | 21.98 | humidity | 50.0 | 90 | > th | dose independent | rect. | 7 | 9 |
| 456 | 21.99 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 4 |
| 494 | 22.00 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 13 | 14 |
| 525 | 22.01 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 13 | 12 |
| 653 | 22.05 | wind | 9.0 | 90 | < th | dose independent | rect. | 16 | 15 |
| 717 | 22.07 | wind | 7.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 730 | 22.07 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 8 |
| 732 | 22.07 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 7 | 9 |
| 769 | 22.08 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 21 | 20 |
| 771 | 22.08 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 21 |
| 792 | 22.08 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 812 | 22.09 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 2 | 14 |
| 814 | 22.09 | temperature | 15.0 | 10 | > th | dose independent | rect. | 16 | 15 |
| 834 | 22.09 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 868 | 22.10 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 881 | 22.10 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 16 | 15 |
| 886 | 22.10 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 11 | 6 |
| 897 | 22.10 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 16 | 15 |
| 902 | 22.11 | radiation | 20.0 | 1440 | < th | dose independent | no | NA | NA |
| 946 | 22.11 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 2 | 23 |
| 956 | 22.11 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 963 | 22.11 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 11 | 5 |