Os02g0604100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0604100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46.87 | 0.322 | 10.1 | 0.0909 | 0.328 | -1.23 | -0.696 | -0.382 | -0.0227 | 16.2 | 25.2 | 4142 | -- | -- |
| 46.99 | 0.319 | 10.1 | 0.0516 | 0.319 | -1.17 | -0.715 | -- | -0.0289 | 16.1 | 26.47 | 4133 | -- | -- |
| 48.22 | 0.323 | 10.1 | 0.0853 | 0.325 | -1.23 | -- | -0.404 | -0.0223 | 16.3 | 25.18 | 4143 | -- | -- |
| 48.35 | 0.324 | 10.1 | 0.0345 | 0.325 | -1.16 | -- | -- | -0.0285 | 16.3 | 26.67 | 4141 | -- | -- |
| 52.8 | 0.338 | 10.1 | 0.021 | -- | -1.2 | -- | -0.0925 | 0.0123 | -- | 28.61 | 4712 | -- | -- |
| 70.54 | 0.394 | 10 | 0.612 | 0.27 | -- | -0.652 | -- | 0.268 | 16.5 | -- | -- | -- | -- |
| 71.66 | 0.396 | 10.1 | 0.607 | 0.268 | -- | -- | -- | 0.264 | 16.8 | -- | -- | -- | -- |
| 52.66 | 0.338 | 10.1 | 0.0348 | -- | -1.16 | -- | -- | -0.00945 | -- | 28.84 | 4717 | -- | -- |
| 48.37 | 0.324 | 10.1 | -- | 0.324 | -1.18 | -- | -- | -0.0351 | 16.2 | 26.58 | 4154 | -- | -- |
| 75.47 | 0.406 | 10 | 0.597 | -- | -- | -- | -- | 0.257 | -- | -- | -- | -- | -- |
| 81.38 | 0.422 | 10.1 | -- | 0.257 | -- | -- | -- | 0.197 | 16.8 | -- | -- | -- | -- |
| 52.68 | 0.338 | 10.1 | -- | -- | -1.18 | -- | -- | -0.0176 | -- | 28.72 | 4727 | -- | -- |
| 84.87 | 0.43 | 10.1 | -- | -- | -- | -- | -- | 0.191 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.45 | temperature | 25 | 4320 | < th | dose dependent | rect. | 22 | 2 |
| 16 | 45.74 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 63 | 46.00 | temperature | 25 | 4320 | < th | dose dependent | sin | 14 | NA |
| 194 | 46.33 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 242 | 46.42 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 320 | 46.56 | temperature | 10 | 4320 | > th | dose dependent | sin | 12 | NA |
| 437 | 46.75 | temperature | 20 | 90 | > th | dose dependent | rect. | 9 | 21 |
| 527 | 46.88 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 608 | 46.99 | temperature | 25 | 4320 | < th | dose dependent | no | NA | NA |
| 663 | 47.06 | temperature | 25 | 4320 | < th | dose dependent | rect. | 3 | 23 |
| 694 | 47.09 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 23 |
| 758 | 47.19 | temperature | 25 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 814 | 47.26 | temperature | 10 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 857 | 47.30 | radiation | 1 | 14400 | > th | dose independent | rect. | 15 | 14 |
| 887 | 47.34 | radiation | 1 | 14400 | > th | dose independent | rect. | 15 | 4 |
| 997 | 47.43 | radiation | 1 | 14400 | < th | dose independent | rect. | 15 | 14 |