FiT-DB / Search/ Help/ Sample detail

Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0604000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Lipolytic enzyme, G-D-S-L family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.23 (0.0347) R2 : 0.117
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.618 (0.0903) R2dC : 0.0909 R2C : 0.0795
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.283 (0.0731) R2dN8 : 0.0376 R2N8 : 0.0261
σ : 0.655
deviance : 196.09
__
_____
C
peak time of C : 4.9
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
179.81 0.63 4.18 0.618 0.592 -0.598 0.662 0.402 -0.0907 4.56 20.4 715 -- --
180.28 0.625 4.19 0.545 0.587 -0.636 0.649 -- -0.104 4.48 20.4 708 -- --
180.89 0.626 4.19 0.624 0.605 -0.619 -- 0.398 -0.0893 4.34 20.43 764 -- --
181.31 0.627 4.2 0.543 0.591 -0.659 -- -- -0.106 4.32 20.43 716 -- --
197.54 0.655 4.2 0.589 -- -0.701 -- 0.11 -0.0805 -- 20.47 480 -- --
191.98 0.65 4.22 0.307 0.608 -- 0.809 -- -0.245 5.02 -- -- -- --
193.63 0.652 4.23 0.305 0.612 -- -- -- -0.249 4.91 -- -- -- --
197.57 0.655 4.2 0.568 -- -0.712 -- -- -0.0849 -- 20.5 478 -- --
188.3 0.639 4.21 -- 0.601 -0.506 -- -- -0.179 4.25 20.5 623 -- --
213.39 0.683 4.23 0.328 -- -- -- -- -0.234 -- -- -- -- --
196.09 0.655 4.23 -- 0.618 -- -- -- -0.283 4.9 -- -- -- --
197.61 0.655 4.24 -- -- -0.555 -- -- -0.197 -- 28.6 217 -- --
216.22 0.686 4.24 -- -- -- -- -- -0.27 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 174.90 temperature 20 720 > th dose independent rect. 4 3
3 175.31 temperature 20 720 > th dose independent rect. 21 10
6 175.44 temperature 20 720 > th dose independent rect. 1 6
7 175.44 temperature 20 720 > th dose independent rect. 23 8
8 175.44 temperature 20 720 > th dose independent rect. 19 14
16 175.76 temperature 15 720 > th dose dependent rect. 4 3
23 176.08 temperature 20 720 > th dose independent rect. 20 19
24 176.12 temperature 20 720 > th dose independent sin 9 NA
36 176.42 temperature 15 720 > th dose dependent rect. 1 6
48 176.68 temperature 15 720 > th dose dependent rect. 23 8
49 176.70 temperature 30 270 < th dose dependent rect. 24 12
66 177.03 temperature 10 270 > th dose dependent rect. 4 11
71 177.13 temperature 20 270 > th dose dependent rect. 3 11
80 177.36 atmosphere 1000 1440 < th dose dependent rect. 8 1
95 177.54 atmosphere 1000 1440 > th dose independent rect. 8 1
102 177.60 radiation 1 14400 < th dose dependent rect. 23 1
106 177.62 temperature 20 270 > th dose dependent sin 5 NA
111 177.65 atmosphere 1000 1440 < th dose independent rect. 8 1
169 178.11 temperature 30 270 < th dose dependent rect. 24 19
234 178.48 radiation 10 4320 < th dose dependent rect. 3 2
237 178.49 atmosphere 995 43200 < th dose dependent rect. 15 4
254 178.58 atmosphere 995 43200 > th dose independent rect. 14 5
258 178.61 atmosphere 995 43200 > th dose independent rect. 15 2
263 178.62 atmosphere 995 43200 < th dose independent rect. 14 5
292 178.73 atmosphere 995 43200 < th dose independent rect. 15 2
310 178.83 temperature 20 720 < th dose independent rect. 24 1
330 178.93 temperature 20 720 > th dose independent rect. 12 21
331 178.94 wind 9 14400 < th dose independent rect. 20 1
348 179.00 wind 9 14400 > th dose independent rect. 20 1
362 179.07 temperature 20 270 > th dose dependent rect. 23 15
388 179.14 temperature 30 30 < th dose dependent rect. 24 23
390 179.17 temperature 20 720 < th dose independent rect. 19 17
395 179.19 wind 9 43200 > th dose dependent rect. 18 3
420 179.29 humidity 90 43200 < th dose independent rect. 13 1
446 179.36 atmosphere 1000 1440 < th dose dependent rect. 11 1
470 179.42 wind 9 4320 > th dose dependent rect. 17 4
496 179.53 wind 9 4320 < th dose independent rect. 17 8
505 179.55 humidity 90 43200 > th dose independent rect. 13 1
508 179.55 temperature 20 10 > th dose dependent rect. 6 10
512 179.56 radiation 1 14400 > th dose independent rect. 18 11
521 179.58 temperature 20 720 < th dose independent sin 9 NA
538 179.60 humidity 90 4320 > th dose independent rect. 21 1
545 179.61 wind 9 4320 > th dose dependent rect. 16 12
552 179.63 radiation 1 14400 > th dose independent rect. 18 1
563 179.63 temperature 25 90 < th dose independent rect. 2 10
565 179.63 temperature 25 90 > th dose independent rect. 3 13
571 179.63 temperature 20 10 > th dose dependent rect. 6 12
613 179.75 wind 9 4320 > th dose independent rect. 17 5
626 179.78 wind 9 4320 < th dose independent rect. 17 5
678 179.90 wind 9 4320 > th dose independent rect. 17 11
688 179.92 atmosphere 995 14400 > th dose independent rect. 12 1
720 179.99 temperature 15 10 > th dose dependent sin 2 NA
743 180.04 atmosphere 995 14400 > th dose independent rect. 6 8
745 180.04 wind 9 14400 > th dose dependent rect. 19 6
754 180.07 temperature 20 720 < th dose independent rect. 24 22
787 180.14 humidity 90 4320 < th dose independent rect. 21 1
796 180.16 atmosphere 995 14400 > th dose independent rect. 8 5
807 180.17 wind 9 14400 > th dose dependent rect. 19 9
833 180.21 temperature 30 720 < th dose dependent rect. 24 5
838 180.22 atmosphere 1005 14400 > th dose independent rect. 11 1
850 180.23 temperature 20 720 < th dose independent rect. 24 16
872 180.26 humidity 90 43200 < th dose independent rect. 12 3
923 180.34 wind 5 1440 > th dose independent rect. 13 2
929 180.34 wind 9 43200 > th dose dependent rect. 18 13
945 180.37 temperature 20 1440 > th dose independent rect. 21 2
957 180.39 wind 9 14400 < th dose independent rect. 19 6
966 180.39 temperature 20 270 > th dose dependent rect. 19 19
970 180.40 atmosphere 1005 14400 < th dose independent rect. 7 17
971 180.40 temperature 20 720 > th dose independent rect. 4 20
979 180.42 wind 9 14400 > th dose independent rect. 19 6
996 180.44 temperature 30 10 < th dose dependent rect. 2 11
997 180.45 atmosphere 1005 14400 < th dose independent rect. 22 1