Os02g0602900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0602900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 248.07 | 0.74 | 5.19 | -2.47 | 0.663 | 1.82 | 0.0287 | -1.36 | -0.124 | 8.41 | 21.49 | 3897 | -- | -- |
| 251.12 | 0.738 | 5.14 | -2.16 | 0.656 | 1.97 | 0.0769 | -- | -0.0725 | 8.51 | 21.4 | 3894 | -- | -- |
| 247.61 | 0.733 | 5.21 | -2.51 | 0.667 | 1.76 | -- | -1.6 | -0.153 | 8.4 | 21.7 | 3897 | -- | -- |
| 251.11 | 0.738 | 5.14 | -2.15 | 0.675 | 1.96 | -- | -- | -0.059 | 8.44 | 21.4 | 3897 | -- | -- |
| 271.09 | 0.767 | 5.23 | -2.55 | -- | 1.76 | -- | -1.67 | -0.156 | -- | 21.68 | 4258 | -- | -- |
| 346.56 | 0.873 | 4.99 | -0.97 | 0.633 | -- | -0.0554 | -- | 0.614 | 7.8 | -- | -- | -- | -- |
| 346.57 | 0.872 | 4.99 | -0.971 | 0.633 | -- | -- | -- | 0.614 | 7.81 | -- | -- | -- | -- |
| 274.61 | 0.772 | 5.15 | -2.14 | -- | 1.97 | -- | -- | -0.0422 | -- | 21.43 | 4258 | -- | -- |
| 313.27 | 0.824 | 5.05 | -- | 0.654 | 1.14 | -- | -- | 0.366 | 8.18 | 22.7 | 1799 | -- | -- |
| 368.25 | 0.897 | 5 | -0.964 | -- | -- | -- | -- | 0.623 | -- | -- | -- | -- | -- |
| 371.44 | 0.902 | 4.96 | -- | 0.626 | -- | -- | -- | 0.722 | 7.92 | -- | -- | -- | -- |
| 330.21 | 0.846 | 5.07 | -- | -- | 1.2 | -- | -- | 0.36 | -- | 22.4 | 1421 | -- | -- |
| 392.75 | 0.925 | 4.98 | -- | -- | -- | -- | -- | 0.73 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 246.00 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 2 | 246.21 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 4 | 246.29 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 14 |
| 10 | 246.50 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |
| 20 | 246.61 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 7 |
| 25 | 246.69 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 5 |
| 61 | 246.96 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 12 |
| 109 | 247.33 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 3 |
| 112 | 247.35 | temperature | 15 | 1440 | > th | dose dependent | sin | 12 | NA |
| 154 | 247.54 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 3 |
| 270 | 248.18 | temperature | 10 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 432 | 249.04 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 23 |
| 457 | 249.15 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 474 | 249.24 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 498 | 249.36 | temperature | 30 | 1440 | < th | dose dependent | rect. | 22 | 23 |
| 511 | 249.40 | temperature | 30 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 781 | 250.54 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 4 |
| 838 | 250.77 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 899 | 250.98 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 7 |