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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0601500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cytochrome P450 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.96 (0.0358) R2 : 0.000384
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0315 (0.0753) R2dN8 : 0.000496 R2N8 : 0.000384
σ : 0.674
deviance : 208.27
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
195.69 0.657 2.21 4.64 0.00574 -60.6 0.5 370 0.0527 22.2 995.1 685 -- --
205.03 0.672 2.96 0.1 0.124 1.05 0.464 -- 0.0462 2.13 995.1 685 -- --
194.67 0.65 2.22 4.49 0.104 -61.8 -- 378 0.0538 4.35 994.8 680 -- --
204.79 0.671 2.96 0.0869 0.15 1.49 -- -- 0.042 4.05 994.8 680 -- --
194.64 0.65 2.27 4.25 -- -62.2 -- 380 0.0495 -- 994.7 687 -- --
206.48 0.674 2.96 0.112 0.103 -- 0.468 -- 0.0431 1.52 -- -- -- --
207 0.674 2.96 0.0953 0.135 -- -- -- 0.0391 4.01 -- -- -- --
205.8 0.668 2.96 0.0794 -- 0.644 -- -- 0.0478 -- 995.1 711 -- --
204.96 0.667 2.96 -- 0.134 0.657 -- -- 0.0318 4.56 995.4 732 -- --
208 0.674 2.96 0.101 -- -- -- -- 0.0427 -- -- -- -- --
207.24 0.673 2.96 -- 0.137 -- -- -- 0.0285 4 -- -- -- --
205.96 0.668 2.96 -- -- 0.662 -- -- 0.0428 -- 995.3 726 -- --
208.27 0.674 2.96 -- -- -- -- -- 0.0315 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 189.61 temperature 25 90 > th dose independent rect. 1 1
2 191.04 temperature 25 90 > th dose dependent rect. 1 1
13 193.36 atmosphere 995 720 > th dose independent sin 6 NA
14 193.49 atmosphere 1000 10 < th dose independent rect. 1 1
21 193.49 atmosphere 1000 10 < th dose dependent rect. 1 1
28 193.50 atmosphere 995 720 < th dose independent rect. 14 1
69 193.50 atmosphere 995 720 < th dose dependent rect. 14 1
119 194.17 atmosphere 995 720 < th dose independent sin 6 NA
122 194.39 atmosphere 995 720 > th dose independent sin 4 NA
129 194.81 atmosphere 995 720 < th dose dependent sin 7 NA
235 197.25 atmosphere 995 720 > th dose independent no NA NA
245 197.64 atmosphere 995 720 < th dose independent no NA NA
462 197.88 atmosphere 995 720 < th dose dependent no NA NA
661 198.16 atmosphere 995 720 > th dose independent sin 14 NA
707 198.43 humidity 50 30 < th dose dependent rect. 17 19
711 198.51 humidity 50 30 < th dose independent rect. 17 19
718 198.67 wind 3 90 < th dose independent rect. 18 1
721 198.74 humidity 50 30 < th dose dependent rect. 17 1
740 198.76 wind 3 90 < th dose dependent rect. 19 1
745 198.81 humidity 50 30 < th dose independent rect. 17 1
763 198.84 radiation 10 30 > th dose independent rect. 17 1
789 199.37 radiation 10 30 > th dose dependent rect. 17 1
823 200.08 atmosphere 995 720 < th dose independent rect. 17 1
825 200.08 atmosphere 995 720 < th dose dependent rect. 17 1
831 200.13 temperature 25 90 > th dose independent rect. 1 5
862 200.23 atmosphere 995 720 > th dose independent rect. 15 16
929 200.54 radiation 1 720 > th dose independent rect. 8 22
957 200.74 radiation 10 10 > th dose independent rect. 6 1
984 200.74 radiation 10 10 > th dose dependent rect. 6 1