Os02g0599500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0599500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.67 | 0.292 | 13 | -0.952 | 0.473 | 0.611 | 0.473 | -9.09 | 0.336 | 4.21 | 30 | 1898 | -- | -- |
| 43.59 | 0.307 | 12.8 | 0.425 | 0.526 | -0.299 | 0.537 | -- | 0.434 | 4.53 | 31.9 | 4062 | -- | -- |
| 38.95 | 0.291 | 13 | -0.955 | 0.474 | 0.615 | -- | -9.3 | 0.336 | 4.02 | 30.03 | 2073 | -- | -- |
| 44.03 | 0.309 | 12.8 | 0.398 | 0.511 | -0.327 | -- | -- | 0.408 | 4 | 31.9 | 4057 | -- | -- |
| 51.06 | 0.333 | 13 | -0.883 | -- | 0.54 | -- | -9 | 0.344 | -- | 30 | 2060 | -- | -- |
| 48.17 | 0.325 | 12.8 | 0.332 | 0.467 | -- | 0.518 | -- | 0.463 | 4.37 | -- | -- | -- | -- |
| 48.88 | 0.327 | 12.8 | 0.327 | 0.47 | -- | -- | -- | 0.46 | 4.19 | -- | -- | -- | -- |
| 52.72 | 0.34 | 12.8 | 0.39 | -- | -0.474 | -- | -- | 0.457 | -- | 30 | 2060 | -- | -- |
| 48.32 | 0.324 | 12.8 | -- | 0.5 | -0.33 | -- | -- | 0.389 | 3.95 | 31.96 | 4063 | -- | -- |
| 60.81 | 0.364 | 12.8 | 0.346 | -- | -- | -- | -- | 0.473 | -- | -- | -- | -- | -- |
| 51.7 | 0.336 | 12.8 | -- | 0.476 | -- | -- | -- | 0.424 | 4.18 | -- | -- | -- | -- |
| 53.51 | 0.342 | 12.8 | -- | -- | -0.42 | -- | -- | 0.451 | -- | 29.3 | 1980 | -- | -- |
| 63.98 | 0.373 | 12.8 | -- | -- | -- | -- | -- | 0.434 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.17 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 2 | 38.32 | humidity | 60 | 4320 | > th | dose independent | rect. | 11 | 3 |
| 4 | 38.43 | humidity | 60 | 4320 | < th | dose independent | rect. | 12 | 2 |
| 13 | 38.93 | temperature | 30 | 720 | > th | dose independent | sin | 5 | NA |
| 17 | 39.01 | temperature | 30 | 720 | > th | dose independent | rect. | 8 | 7 |
| 64 | 39.21 | temperature | 30 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 80 | 39.32 | temperature | 30 | 720 | < th | dose independent | sin | 3 | NA |
| 82 | 39.32 | temperature | 30 | 720 | < th | dose independent | rect. | 1 | 16 |
| 83 | 39.34 | temperature | 30 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 99 | 39.37 | humidity | 50 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 100 | 39.37 | temperature | 30 | 14400 | < th | dose independent | rect. | 1 | 8 |
| 101 | 39.38 | temperature | 30 | 14400 | < th | dose independent | rect. | 21 | 12 |
| 102 | 39.40 | wind | 1 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 135 | 39.42 | temperature | 30 | 14400 | < th | dose independent | rect. | 3 | 6 |
| 137 | 39.42 | humidity | 50 | 14400 | > th | dose independent | rect. | 15 | 9 |
| 140 | 39.42 | humidity | 50 | 14400 | > th | dose independent | rect. | 15 | 15 |
| 141 | 39.42 | humidity | 50 | 14400 | > th | dose independent | rect. | 15 | 17 |
| 142 | 39.42 | humidity | 50 | 14400 | > th | dose independent | rect. | 15 | 19 |
| 151 | 39.45 | humidity | 50 | 14400 | > th | dose independent | sin | 12 | NA |
| 152 | 39.45 | temperature | 30 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 156 | 39.46 | humidity | 50 | 14400 | > th | dose independent | rect. | 15 | 11 |
| 186 | 39.53 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 11 |
| 192 | 39.55 | temperature | 30 | 1440 | < th | dose independent | rect. | 8 | 7 |
| 204 | 39.58 | temperature | 30 | 1440 | < th | dose independent | rect. | 20 | 19 |
| 215 | 39.61 | temperature | 30 | 720 | > th | dose dependent | sin | 7 | NA |
| 253 | 39.67 | temperature | 25 | 720 | > th | dose dependent | rect. | 7 | 2 |
| 255 | 39.68 | temperature | 30 | 720 | > th | dose dependent | rect. | 8 | 5 |
| 271 | 39.70 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 21 |
| 275 | 39.71 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 6 |
| 276 | 39.72 | humidity | 50 | 14400 | < th | dose independent | sin | 11 | NA |
| 285 | 39.75 | humidity | 60 | 14400 | < th | dose independent | rect. | 17 | 21 |
| 288 | 39.76 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 6 |
| 294 | 39.78 | humidity | 70 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 299 | 39.78 | humidity | 70 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 328 | 39.80 | humidity | 70 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 334 | 39.81 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 383 | 39.86 | temperature | 30 | 720 | > th | dose dependent | rect. | 11 | 2 |
| 402 | 39.91 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 495 | 39.91 | temperature | 30 | 1440 | > th | dose independent | rect. | 12 | 23 |
| 534 | 39.93 | wind | 1 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 535 | 39.93 | wind | 1 | 14400 | > th | dose independent | rect. | 2 | 6 |
| 545 | 39.95 | temperature | 30 | 1440 | > th | dose independent | rect. | 10 | 23 |
| 602 | 40.02 | wind | 1 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 611 | 40.04 | humidity | 50 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 612 | 40.04 | temperature | 30 | 720 | > th | dose independent | rect. | 8 | 3 |
| 677 | 40.07 | wind | 1 | 14400 | > th | dose independent | rect. | 24 | 6 |
| 693 | 40.10 | humidity | 80 | 4320 | < th | dose dependent | rect. | 10 | 16 |
| 698 | 40.11 | humidity | 50 | 14400 | < th | dose independent | rect. | 15 | 20 |
| 716 | 40.14 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 17 |
| 728 | 40.15 | temperature | 30 | 1440 | < th | dose independent | rect. | 8 | 13 |
| 791 | 40.16 | humidity | 80 | 4320 | < th | dose dependent | sin | 16 | NA |
| 816 | 40.18 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 820 | 40.18 | temperature | 30 | 4320 | > th | dose independent | rect. | 8 | 4 |
| 846 | 40.18 | temperature | 30 | 1440 | < th | dose independent | rect. | 8 | 21 |
| 863 | 40.18 | humidity | 80 | 4320 | < th | dose dependent | rect. | 19 | 3 |