Os02g0598600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os02g0598600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 39.39 | 0.295 | 2.92 | 0.0498 | 0.157 | -0.174 | -0.383 | 0.139 | 0.0115 | 1.17 | 9.67 | 30 | -- | -- |
| 39.42 | 0.292 | 2.92 | 0.0468 | 0.151 | -0.167 | -0.243 | -- | 0.0107 | 1.4 | 9.613 | 29 | -- | -- |
| 39.59 | 0.293 | 2.91 | 0.0736 | 0.145 | -0.158 | -- | -0.121 | 0.0273 | 1.71 | 9.766 | 29 | -- | -- |
| 39.66 | 0.293 | 2.91 | 0.0551 | 0.151 | -0.167 | -- | -- | 0.0122 | 1.41 | 9.61 | 29 | -- | -- |
| 39.98 | 0.296 | 2.91 | 0.0368 | -- | -0.0673 | -- | -0.148 | 0.021 | -- | 9.766 | 29 | -- | -- |
| 40.28 | 0.298 | 2.91 | 0.0348 | 0.0479 | -- | 0.21 | -- | 0.0183 | 10.9 | -- | -- | -- | -- |
| 40.41 | 0.298 | 2.91 | 0.0422 | 0.0579 | -- | -- | -- | 0.0181 | 8.65 | -- | -- | -- | -- |
| 40.11 | 0.295 | 2.91 | 0.0495 | -- | -0.0705 | -- | -- | 0.0178 | -- | 9.988 | 19 | -- | -- |
| 39.74 | 0.294 | 2.92 | -- | 0.149 | -0.164 | -- | -- | 0.00625 | 1.44 | 9.67 | 29 | -- | -- |
| 40.6 | 0.298 | 2.91 | 0.0424 | -- | -- | -- | -- | 0.0186 | -- | -- | -- | -- | -- |
| 40.46 | 0.298 | 2.91 | -- | 0.058 | -- | -- | -- | 0.0134 | 8.59 | -- | -- | -- | -- |
| 40.12 | 0.296 | 2.91 | -- | -- | -0.0738 | -- | -- | 0.0145 | -- | 12.44 | 17 | -- | -- |
| 40.64 | 0.298 | 2.91 | -- | -- | -- | -- | -- | 0.0139 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 36.19 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 8 | 36.19 | wind | 1.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 9 | 36.19 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 16 | 36.20 | wind | 1.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 19 | 36.21 | humidity | 70.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 82 | 36.21 | humidity | 70.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 149 | 36.49 | temperature | 25.0 | 90 | > th | dose independent | rect. | 21 | 1 |
| 150 | 36.49 | temperature | 25.0 | 10 | > th | dose independent | rect. | 21 | 2 |
| 151 | 36.76 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 21 | 2 |
| 153 | 36.79 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 21 | 1 |
| 171 | 37.37 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 23 | 23 |
| 173 | 37.43 | wind | 3.0 | 10 | < th | dose independent | rect. | 22 | 1 |
| 178 | 37.50 | wind | 5.0 | 10 | < th | dose dependent | rect. | 22 | 1 |
| 180 | 37.51 | humidity | 80.0 | 10 | > th | dose independent | rect. | 22 | 1 |
| 182 | 37.51 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 199 | 37.55 | humidity | 90.0 | 10 | < th | dose independent | rect. | 22 | 1 |
| 208 | 37.56 | temperature | 10.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 210 | 37.56 | temperature | 30.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 211 | 37.56 | humidity | 50.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 215 | 37.56 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 217 | 37.56 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 219 | 37.56 | radiation | 1.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 224 | 37.56 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 22 | 1 |
| 225 | 37.56 | temperature | 10.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 226 | 37.56 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 229 | 37.56 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 234 | 37.56 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 235 | 37.57 | wind | 1.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 236 | 37.57 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 238 | 37.58 | wind | 9.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 239 | 37.58 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 242 | 37.58 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 246 | 37.58 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 256 | 37.58 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 257 | 37.58 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 278 | 37.58 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 24 | 23 |
| 285 | 37.58 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 329 | 37.61 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 333 | 37.63 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 340 | 37.65 | wind | 1.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 347 | 37.68 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 23 | 23 |
| 350 | 37.68 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 367 | 37.79 | radiation | 30.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 446 | 37.96 | wind | 9.0 | 30 | < th | dose independent | rect. | 23 | 23 |
| 449 | 37.97 | radiation | 20.0 | 30 | > th | dose dependent | rect. | 7 | 2 |
| 470 | 38.00 | radiation | 10.0 | 30 | < th | dose independent | rect. | 23 | 23 |
| 471 | 38.01 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 473 | 38.01 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 503 | 38.12 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 526 | 38.23 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 23 | 11 |
| 553 | 38.31 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 7 | 2 |
| 558 | 38.32 | radiation | 10.0 | 90 | < th | dose independent | rect. | 23 | 11 |
| 617 | 38.43 | humidity | 50.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 628 | 38.48 | temperature | 25.0 | 30 | > th | dose independent | rect. | 7 | 2 |
| 630 | 38.48 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 635 | 38.50 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 639 | 38.50 | atmosphere | 1000.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 821 | 38.64 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 5 | 4 |
| 823 | 38.65 | wind | 1.0 | 1440 | > th | dose independent | rect. | 19 | 4 |
| 835 | 38.66 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 23 | 22 |
| 840 | 38.67 | wind | 1.0 | 1440 | < th | dose independent | rect. | 19 | 4 |
| 851 | 38.68 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 20 | 3 |
| 881 | 38.70 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 22 | 11 |
| 963 | 38.75 | wind | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |