Os02g0598200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transcriptional factor B3 family protein.
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Os02g0598200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transcriptional factor B3 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 187.55 | 0.643 | 3.08 | 0.0609 | 0.00126 | -0.519 | 0.899 | -0.661 | 0.24 | 13.1 | 20.15 | 332 | -- | -- |
| 188.15 | 0.639 | 3.07 | 0.166 | 0.0329 | -0.419 | 0.859 | -- | 0.265 | 12.4 | 20.4 | 166 | -- | -- |
| 190.53 | 0.643 | 3.08 | 0.0936 | 0.0159 | -0.517 | -- | -0.657 | 0.243 | 0.696 | 20.2 | 420 | -- | -- |
| 190.07 | 0.642 | 3.07 | 0.3 | 0.0289 | -0.555 | -- | -- | 0.302 | 0.849 | 20.9 | 1780 | -- | -- |
| 189.4 | 0.641 | 3.09 | 0.0415 | -- | -0.476 | -- | -0.815 | 0.243 | -- | 20.9 | 557 | -- | -- |
| 194.61 | 0.654 | 3.09 | 0.0218 | 0.0241 | -- | 0.864 | -- | 0.182 | 11.3 | -- | -- | -- | -- |
| 196.63 | 0.657 | 3.08 | 0.0519 | 0.153 | -- | -- | -- | 0.181 | 5.91 | -- | -- | -- | -- |
| 190.13 | 0.642 | 3.07 | 0.267 | -- | -0.542 | -- | -- | 0.308 | -- | 20.9 | 1800 | -- | -- |
| 191.23 | 0.644 | 3.05 | -- | 0.152 | -0.478 | -- | -- | 0.315 | 5.26 | 21 | 1651 | -- | -- |
| 197.84 | 0.657 | 3.08 | 0.0565 | -- | -- | -- | -- | 0.185 | -- | -- | -- | -- | -- |
| 196.7 | 0.656 | 3.08 | -- | 0.154 | -- | -- | -- | 0.176 | 5.9 | -- | -- | -- | -- |
| 192.12 | 0.646 | 3.06 | -- | -- | -0.446 | -- | -- | 0.27 | -- | 20.86 | 1780 | -- | -- |
| 197.93 | 0.657 | 3.09 | -- | -- | -- | -- | -- | 0.179 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 175.50 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 3 | 176.88 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 7 | 1 |
| 26 | 179.20 | wind | 5.0 | 10 | > th | dose dependent | rect. | 3 | 6 |
| 34 | 180.35 | temperature | 20.0 | 270 | < th | dose independent | rect. | 4 | 4 |
| 43 | 180.64 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 50 | 181.09 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 6 | 9 |
| 51 | 181.13 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 4 | 4 |
| 56 | 181.28 | temperature | 20.0 | 10 | < th | dose independent | rect. | 6 | 14 |
| 58 | 181.32 | temperature | 20.0 | 270 | < th | dose independent | rect. | 5 | 1 |
| 60 | 181.32 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 6 | 12 |
| 62 | 181.35 | radiation | 10.0 | 90 | < th | dose independent | rect. | 6 | 3 |
| 64 | 181.35 | temperature | 20.0 | 90 | < th | dose independent | rect. | 6 | 12 |
| 66 | 181.40 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 6 | 14 |
| 71 | 181.44 | temperature | 20.0 | 90 | < th | dose independent | rect. | 6 | 5 |
| 84 | 181.48 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 6 | 3 |
| 95 | 181.54 | temperature | 20.0 | 10 | < th | dose independent | rect. | 6 | 3 |
| 96 | 181.54 | temperature | 20.0 | 10 | < th | dose independent | rect. | 6 | 9 |
| 101 | 181.57 | radiation | 20.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 111 | 181.63 | temperature | 20.0 | 10 | < th | dose independent | rect. | 6 | 6 |
| 166 | 181.95 | wind | 5.0 | 10 | > th | dose independent | rect. | 8 | 1 |
| 169 | 181.95 | wind | 5.0 | 10 | > th | dose dependent | rect. | 8 | 1 |
| 178 | 181.99 | wind | 5.0 | 10 | > th | dose independent | rect. | 3 | 6 |
| 235 | 182.11 | wind | 1.0 | 10 | < th | dose independent | rect. | 8 | 1 |
| 237 | 182.11 | wind | 1.0 | 10 | < th | dose dependent | rect. | 8 | 1 |
| 317 | 182.97 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 6 | 1 |
| 326 | 183.12 | wind | 3.0 | 90 | > th | dose dependent | rect. | 6 | 1 |
| 331 | 183.22 | temperature | 20.0 | 10 | > th | dose independent | sin | 22 | NA |
| 366 | 183.44 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 381 | 183.56 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 384 | 183.59 | wind | 1.0 | 90 | < th | dose independent | rect. | 6 | 1 |
| 390 | 183.67 | humidity | 80.0 | 90 | < th | dose independent | rect. | 6 | 1 |
| 392 | 183.71 | humidity | 60.0 | 10 | < th | dose independent | rect. | 14 | 1 |
| 396 | 183.75 | wind | 1.0 | 270 | < th | dose dependent | rect. | 6 | 1 |
| 423 | 183.96 | wind | 5.0 | 4320 | > th | dose independent | rect. | 19 | 8 |
| 424 | 184.00 | wind | 3.0 | 10 | > th | dose independent | rect. | 2 | 2 |
| 427 | 184.01 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 12 | 21 |
| 431 | 184.07 | wind | 1.0 | 90 | < th | dose independent | rect. | 6 | 3 |
| 437 | 184.16 | wind | 1.0 | 270 | < th | dose dependent | rect. | 4 | 3 |
| 438 | 184.18 | humidity | 60.0 | 30 | < th | dose independent | rect. | 12 | 3 |
| 448 | 184.23 | temperature | 20.0 | 270 | < th | dose independent | sin | 1 | NA |
| 450 | 184.24 | radiation | 10.0 | 90 | < th | dose independent | rect. | 6 | 21 |
| 471 | 184.35 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 475 | 184.40 | temperature | 20.0 | 10 | < th | dose independent | sin | 22 | NA |
| 491 | 184.53 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 7 | 1 |
| 496 | 184.58 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 504 | 184.64 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 6 | 3 |
| 512 | 184.67 | radiation | 1.0 | 90 | > th | dose independent | rect. | 6 | 3 |
| 527 | 184.75 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 530 | 184.77 | wind | 9.0 | 14400 | < th | dose independent | rect. | 8 | 2 |
| 538 | 184.82 | temperature | 20.0 | 270 | > th | dose independent | sin | 1 | NA |
| 539 | 184.82 | radiation | 10.0 | 90 | < th | dose independent | rect. | 6 | 8 |
| 546 | 184.86 | wind | 3.0 | 90 | > th | dose dependent | rect. | 3 | 1 |
| 552 | 184.88 | wind | 3.0 | 10 | > th | dose dependent | rect. | 2 | 3 |
| 561 | 184.91 | wind | 3.0 | 90 | > th | dose independent | rect. | 6 | 1 |
| 576 | 184.95 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 3 | 17 |
| 582 | 184.98 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 587 | 185.01 | wind | 5.0 | 90 | > th | dose independent | rect. | 2 | 2 |
| 644 | 185.20 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 6 | 4 |
| 663 | 185.26 | wind | 1.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 667 | 185.27 | humidity | 70.0 | 90 | > th | dose independent | rect. | 6 | 3 |
| 678 | 185.31 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 21 | 4 |
| 679 | 185.32 | radiation | 40.0 | 90 | < th | dose independent | rect. | 6 | 3 |
| 680 | 185.32 | temperature | 25.0 | 30 | < th | dose dependent | sin | 23 | NA |
| 696 | 185.37 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 17 | 16 |
| 710 | 185.44 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 6 | 3 |
| 711 | 185.44 | wind | 9.0 | 90 | < th | dose independent | rect. | 9 | 21 |
| 712 | 185.44 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 6 | 3 |
| 718 | 185.46 | wind | 5.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 719 | 185.46 | humidity | 60.0 | 90 | < th | dose dependent | rect. | 9 | 1 |
| 738 | 185.47 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 15 | 17 |
| 741 | 185.50 | wind | 7.0 | 90 | < th | dose independent | rect. | 6 | 3 |
| 743 | 185.50 | temperature | 10.0 | 90 | > th | dose independent | rect. | 6 | 3 |
| 745 | 185.50 | humidity | 50.0 | 90 | > th | dose independent | rect. | 6 | 3 |
| 750 | 185.50 | temperature | 10.0 | 90 | > th | dose independent | rect. | 9 | 21 |
| 755 | 185.51 | radiation | 10.0 | 90 | < th | dose independent | rect. | 6 | 17 |
| 758 | 185.52 | humidity | 70.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 761 | 185.52 | radiation | 10.0 | 90 | < th | dose independent | rect. | 6 | 15 |
| 772 | 185.56 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 780 | 185.58 | radiation | 10.0 | 90 | < th | dose independent | rect. | 6 | 19 |
| 798 | 185.66 | radiation | 10.0 | 90 | < th | dose independent | rect. | 21 | 9 |
| 819 | 185.73 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 5 |
| 827 | 185.73 | temperature | 20.0 | 270 | > th | dose independent | rect. | 2 | 13 |
| 830 | 185.74 | humidity | 60.0 | 90 | < th | dose independent | rect. | 9 | 1 |
| 860 | 185.81 | radiation | 1.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 878 | 185.87 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 893 | 185.89 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 906 | 185.92 | wind | 9.0 | 90 | < th | dose dependent | rect. | 6 | 3 |
| 909 | 185.92 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 21 | 9 |
| 915 | 185.93 | temperature | 30.0 | 270 | < th | dose independent | rect. | 16 | 16 |
| 937 | 185.98 | wind | 9.0 | 90 | < th | dose independent | rect. | 21 | 9 |
| 938 | 185.98 | temperature | 10.0 | 90 | > th | dose independent | rect. | 21 | 9 |
| 939 | 185.98 | temperature | 30.0 | 90 | < th | dose independent | rect. | 21 | 9 |
| 940 | 185.98 | humidity | 50.0 | 90 | > th | dose independent | rect. | 21 | 9 |
| 943 | 185.98 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 21 | 9 |
| 947 | 185.98 | temperature | 10.0 | 90 | > th | dose independent | rect. | 6 | 15 |
| 948 | 185.98 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 6 | 15 |
| 979 | 186.05 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 6 | 3 |
| 985 | 186.07 | humidity | 80.0 | 270 | < th | dose dependent | rect. | 4 | 3 |
| 987 | 186.07 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 21 | 9 |
| 989 | 186.08 | humidity | 90.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 994 | 186.08 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 9 | 21 |
| 996 | 186.09 | humidity | 80.0 | 270 | < th | dose independent | rect. | 4 | 3 |