Os02g0597300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os02g0597300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 117.11 | 0.508 | 8.76 | 0.322 | 0.661 | 8.93 | 0.0586 | -23.5 | -0.0187 | 4.21 | 0.9281 | 96 | -- | -- |
| 117.69 | 0.505 | 8.73 | 0.445 | 0.662 | 3.54 | 0.066 | -- | -0.0187 | 4.22 | 1.217 | 117 | -- | -- |
| 116.7 | 0.503 | 8.78 | 0.281 | 0.651 | 10.5 | -- | -29.2 | -0.0188 | 4.25 | 0.7722 | 151 | -- | -- |
| 117.7 | 0.505 | 8.73 | 0.445 | 0.662 | 3.53 | -- | -- | -0.0191 | 4.23 | 1.217 | 117 | -- | -- |
| 139.93 | 0.551 | 8.78 | 0.285 | -- | 10.3 | -- | -29.2 | 0.00421 | -- | 0.7305 | 154 | -- | -- |
| 136.67 | 0.548 | 8.73 | 0.507 | 0.615 | -- | -0.102 | -- | -0.0317 | 4.04 | -- | -- | -- | -- |
| 136.69 | 0.548 | 8.73 | 0.508 | 0.614 | -- | -- | -- | -0.0312 | 4 | -- | -- | -- | -- |
| 141.26 | 0.554 | 8.73 | 0.477 | -- | 3.25 | -- | -- | -0.00281 | -- | 1.244 | 80 | -- | -- |
| 122.87 | 0.516 | 8.74 | -- | 0.673 | 3.59 | -- | -- | -0.0674 | 4.23 | 1.129 | 95 | -- | -- |
| 157.25 | 0.586 | 8.74 | 0.533 | -- | -- | -- | -- | -0.0148 | -- | -- | -- | -- | -- |
| 143.49 | 0.56 | 8.75 | -- | 0.624 | -- | -- | -- | -0.0877 | 3.99 | -- | -- | -- | -- |
| 146.86 | 0.564 | 8.74 | -- | -- | 3.29 | -- | -- | -0.0527 | -- | 1.124 | 150 | -- | -- |
| 164.74 | 0.599 | 8.75 | -- | -- | -- | -- | -- | -0.0739 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 107.36 | radiation | 1.0 | 270 | < th | dose independent | rect. | 17 | 1 |
| 2 | 108.34 | temperature | 25.0 | 270 | < th | dose independent | rect. | 17 | 1 |
| 3 | 108.65 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 17 | 1 |
| 4 | 109.73 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 7 | 11 |
| 5 | 109.80 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 10 | 8 |
| 17 | 111.63 | radiation | 1.0 | 270 | < th | dose independent | rect. | 5 | 13 |
| 18 | 111.73 | radiation | 1.0 | 270 | < th | dose independent | rect. | 11 | 7 |
| 23 | 112.34 | radiation | 1.0 | 270 | < th | dose independent | rect. | 7 | 11 |
| 26 | 112.76 | temperature | 25.0 | 10 | < th | dose independent | rect. | 16 | 4 |
| 28 | 113.09 | temperature | 25.0 | 90 | < th | dose independent | rect. | 15 | 6 |
| 38 | 114.05 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 14 | 5 |
| 43 | 114.34 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 16 | 3 |
| 61 | 115.07 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 4 | 15 |
| 70 | 115.33 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 17 | 1 |
| 72 | 115.41 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 4 | 15 |
| 103 | 116.09 | precipitation | 0.1 | 90 | > th | dose dependent | sin | 0 | NA |
| 118 | 116.46 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 21 | 22 |
| 119 | 116.48 | precipitation | 0.1 | 90 | < th | dose independent | sin | 0 | NA |
| 120 | 116.48 | precipitation | 0.1 | 90 | < th | dose dependent | sin | 0 | NA |
| 126 | 116.57 | precipitation | 0.1 | 90 | > th | dose independent | sin | 23 | NA |
| 131 | 116.63 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 2 | 17 |
| 145 | 116.82 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 7 | 13 |
| 149 | 116.82 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 7 | 13 |
| 203 | 117.42 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 3 |
| 223 | 117.42 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 3 |
| 257 | 117.52 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 21 | NA |
| 262 | 117.56 | precipitation | 0.1 | 10 | < th | dose independent | sin | 21 | NA |
| 263 | 117.56 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 21 | NA |
| 269 | 117.61 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 17 | 1 |
| 275 | 117.66 | precipitation | 0.1 | 10 | > th | dose independent | sin | 21 | NA |
| 276 | 117.66 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 16 | 8 |
| 294 | 117.76 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 16 | 11 |
| 295 | 117.76 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 23 | 20 |
| 298 | 117.78 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 2 | 17 |
| 333 | 117.85 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 13 | 11 |
| 336 | 117.85 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 13 | 14 |
| 342 | 117.86 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 13 | 19 |
| 352 | 117.87 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 19 | 23 |
| 353 | 117.87 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 16 | 8 |
| 358 | 117.87 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 16 | 11 |
| 374 | 117.92 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 16 | 16 |
| 383 | 117.95 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 16 | 22 |
| 389 | 118.00 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 13 | 11 |
| 395 | 118.00 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 5 | 19 |
| 396 | 118.00 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 5 | 22 |
| 549 | 118.14 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 2 | 22 |
| 555 | 118.15 | precipitation | 0.1 | 90 | > th | dose dependent | no | NA | NA |
| 569 | 118.16 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 647 | 118.32 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 6 | 12 |
| 662 | 118.34 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 5 | 19 |
| 681 | 118.40 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 5 | 22 |
| 685 | 118.42 | humidity | 90.0 | 270 | > th | dose independent | rect. | 17 | 1 |
| 703 | 118.56 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 7 | 18 |
| 719 | 118.72 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 7 | 23 |
| 722 | 118.72 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 7 | 23 |
| 744 | 118.86 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 16 | 16 |
| 751 | 118.89 | radiation | 1.0 | 720 | > th | dose independent | rect. | 9 | 10 |
| 790 | 119.01 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 13 | 19 |
| 813 | 119.10 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 16 | 22 |
| 824 | 119.16 | temperature | 25.0 | 90 | > th | dose independent | rect. | 11 | 17 |
| 829 | 119.19 | temperature | 25.0 | 30 | > th | dose independent | sin | 17 | NA |
| 851 | 119.26 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 9 | 16 |
| 853 | 119.28 | radiation | 1.0 | 720 | < th | dose independent | rect. | 7 | 18 |
| 858 | 119.29 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 2 | 22 |
| 881 | 119.35 | radiation | 1.0 | 720 | > th | dose independent | rect. | 17 | 1 |
| 889 | 119.37 | precipitation | 0.1 | 90 | > th | dose independent | no | NA | NA |
| 890 | 119.37 | precipitation | 0.1 | 90 | < th | dose independent | no | NA | NA |
| 901 | 119.37 | precipitation | 0.1 | 90 | < th | dose dependent | no | NA | NA |
| 902 | 119.38 | radiation | 1.0 | 30 | < th | dose independent | rect. | 6 | 12 |
| 941 | 119.49 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 11 | 7 |
| 980 | 119.71 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 14 | 6 |
| 981 | 119.72 | radiation | 1.0 | 720 | < th | dose independent | rect. | 16 | 9 |