Os02g0596300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os02g0596300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 223.3 | 0.702 | 3.16 | 0.21 | 0.163 | 0.365 | 0.0842 | -1.82 | -0.0348 | 17.1 | 92.29 | 4124 | -- | -- |
| 225.89 | 0.7 | 3.16 | 0.062 | 0.118 | 0.663 | 0.364 | -- | -0.187 | 18.3 | 95.91 | 5270 | -- | -- |
| 223.31 | 0.696 | 3.16 | 0.208 | 0.165 | 0.366 | -- | -1.82 | -0.0341 | 17.3 | 92.27 | 4123 | -- | -- |
| 224.38 | 0.698 | 3.16 | 0.0808 | 0.141 | 1.04 | -- | -- | -0.175 | 18.3 | 95.95 | 5270 | -- | -- |
| 224.72 | 0.698 | 3.16 | 0.208 | -- | 0.346 | -- | -1.82 | -0.0448 | -- | 92.32 | 4120 | -- | -- |
| 232.18 | 0.714 | 3.17 | -0.0484 | 0.15 | -- | 0.0477 | -- | -0.221 | 17 | -- | -- | -- | -- |
| 232.18 | 0.714 | 3.17 | -0.0483 | 0.15 | -- | -- | -- | -0.221 | 17 | -- | -- | -- | -- |
| 224.39 | 0.698 | 3.16 | 0.117 | -- | 1.41 | -- | -- | -0.131 | -- | 96.02 | 4014 | -- | -- |
| 223.44 | 0.696 | 3.16 | -- | 0.132 | 1.36 | -- | -- | -0.186 | 18.1 | 96.21 | 4007 | -- | -- |
| 233.37 | 0.714 | 3.17 | -0.0538 | -- | -- | -- | -- | -0.225 | -- | -- | -- | -- | -- |
| 232.24 | 0.713 | 3.17 | -- | 0.151 | -- | -- | -- | -0.216 | 17 | -- | -- | -- | -- |
| 224.47 | 0.698 | 3.16 | -- | -- | 1.37 | -- | -- | -0.194 | -- | 96.2 | 4006 | -- | -- |
| 233.44 | 0.713 | 3.17 | -- | -- | -- | -- | -- | -0.219 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 216.85 | humidity | 90.0 | 10 | < th | dose independent | rect. | 12 | 10 |
| 4 | 218.03 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 1 | 2 |
| 5 | 218.30 | humidity | 90.0 | 10 | < th | dose independent | rect. | 12 | 16 |
| 8 | 218.47 | humidity | 90.0 | 270 | < th | dose independent | rect. | 11 | 9 |
| 12 | 218.68 | temperature | 20.0 | 90 | < th | dose independent | rect. | 24 | 3 |
| 20 | 218.88 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 30 | 219.28 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 10 | 15 |
| 32 | 219.34 | humidity | 50.0 | 10 | < th | dose dependent | rect. | 13 | 5 |
| 52 | 219.52 | humidity | 50.0 | 10 | < th | dose independent | rect. | 13 | 5 |
| 73 | 219.58 | humidity | 90.0 | 10 | > th | dose independent | rect. | 11 | 16 |
| 84 | 219.78 | temperature | 20.0 | 90 | < th | dose independent | rect. | 24 | 5 |
| 96 | 219.97 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 10 | 15 |
| 109 | 220.15 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 12 | 16 |
| 138 | 220.33 | humidity | 90.0 | 10 | > th | dose independent | rect. | 11 | 13 |
| 144 | 220.42 | humidity | 60.0 | 90 | < th | dose dependent | rect. | 13 | 1 |
| 163 | 220.66 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 13 | 15 |
| 171 | 220.69 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 8 | 16 |
| 174 | 220.71 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 4 |
| 179 | 220.73 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 13 | 18 |
| 190 | 220.84 | humidity | 50.0 | 90 | < th | dose independent | rect. | 13 | 1 |
| 196 | 220.87 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 207 | 220.89 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 12 | 10 |
| 232 | 220.93 | wind | 3.0 | 90 | > th | dose independent | rect. | 12 | 11 |
| 250 | 220.96 | humidity | 90.0 | 10 | < th | dose independent | sin | 17 | NA |
| 268 | 220.98 | wind | 1.0 | 90 | > th | dose independent | rect. | 12 | 9 |
| 279 | 221.08 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 12 | 9 |
| 282 | 221.08 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 12 | 9 |
| 383 | 221.34 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 12 | 9 |
| 387 | 221.36 | humidity | 50.0 | 10 | < th | dose independent | sin | 13 | NA |
| 391 | 221.37 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 21 | 15 |
| 395 | 221.40 | humidity | 50.0 | 10 | < th | dose dependent | sin | 12 | NA |
| 406 | 221.46 | temperature | 30.0 | 90 | < th | dose independent | rect. | 21 | 15 |
| 413 | 221.48 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 16 |
| 498 | 221.61 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 505 | 221.65 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 12 | 9 |
| 507 | 221.66 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 13 | 11 |
| 508 | 221.67 | temperature | 10.0 | 90 | > th | dose independent | rect. | 12 | 9 |
| 511 | 221.67 | temperature | 10.0 | 90 | > th | dose independent | rect. | 21 | 15 |
| 519 | 221.69 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 12 | 21 |
| 522 | 221.70 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 13 | 9 |
| 524 | 221.71 | humidity | 90.0 | 10 | > th | dose independent | sin | 18 | NA |
| 547 | 221.72 | wind | 3.0 | 90 | > th | dose independent | rect. | 12 | 15 |
| 554 | 221.75 | wind | 3.0 | 90 | > th | dose independent | rect. | 12 | 13 |
| 558 | 221.76 | wind | 3.0 | 90 | > th | dose independent | rect. | 12 | 17 |
| 563 | 221.80 | wind | 3.0 | 90 | > th | dose independent | rect. | 12 | 19 |
| 571 | 221.84 | temperature | 30.0 | 10 | < th | dose independent | rect. | 21 | 16 |
| 581 | 221.87 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 24 | 9 |
| 591 | 221.92 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 21 | 15 |
| 593 | 221.92 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 21 | 15 |
| 596 | 221.95 | wind | 9.0 | 90 | < th | dose independent | rect. | 12 | 9 |
| 597 | 221.95 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 24 | 23 |
| 624 | 222.12 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 684 | 222.29 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 1 | 7 |
| 695 | 222.33 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 718 | 222.37 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 742 | 222.39 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 12 | 9 |
| 766 | 222.41 | wind | 9.0 | 90 | < th | dose independent | rect. | 21 | 15 |
| 780 | 222.44 | wind | 1.0 | 30 | > th | dose dependent | rect. | 12 | 10 |
| 800 | 222.50 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 801 | 222.50 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 13 | 9 |
| 804 | 222.50 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 15 |
| 807 | 222.50 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 22 | 15 |
| 827 | 222.56 | humidity | 50.0 | 10 | > th | dose independent | sin | 13 | NA |
| 838 | 222.58 | wind | 1.0 | 30 | > th | dose dependent | rect. | 13 | 18 |
| 840 | 222.59 | humidity | 50.0 | 10 | > th | dose independent | rect. | 11 | 14 |
| 863 | 222.63 | humidity | 50.0 | 90 | > th | dose independent | rect. | 21 | 15 |
| 938 | 222.77 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 960 | 222.80 | temperature | 25.0 | 270 | < th | dose independent | rect. | 7 | 4 |
| 963 | 222.80 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 21 | 15 |
| 973 | 222.81 | humidity | 80.0 | 90 | > th | dose dependent | sin | 18 | NA |
| 974 | 222.81 | atmosphere | 1000.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 982 | 222.82 | wind | 1.0 | 30 | > th | dose dependent | rect. | 12 | 21 |