Os02g0595900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0595900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 254.51 | 0.75 | 3.04 | -0.146 | 0.351 | -0.435 | -0.803 | 2.67 | -0.266 | 6.32 | 69 | 1432 | -- | -- |
| 270.7 | 0.766 | 3.1 | -0.463 | 0.319 | -0.336 | -0.708 | -- | -0.34 | 6.42 | 68.93 | 1623 | -- | -- |
| 256 | 0.745 | 3.04 | -0.159 | 0.345 | -0.44 | -- | 2.66 | -0.264 | 6.4 | 68.56 | 1455 | -- | -- |
| 272.05 | 0.768 | 3.09 | -0.477 | 0.319 | -0.347 | -- | -- | -0.335 | 6.35 | 69 | 1627 | -- | -- |
| 261.09 | 0.753 | 3.06 | -0.223 | -- | -0.438 | -- | 2.78 | -0.305 | -- | 67.91 | 1525 | -- | -- |
| 274.19 | 0.776 | 3.09 | -0.527 | 0.349 | -- | -0.796 | -- | -0.338 | 6.15 | -- | -- | -- | -- |
| 275.75 | 0.778 | 3.09 | -0.535 | 0.345 | -- | -- | -- | -0.335 | 6.14 | -- | -- | -- | -- |
| 275.8 | 0.773 | 3.09 | -0.458 | -- | -0.481 | -- | -- | -0.299 | -- | 69.12 | 1953 | -- | -- |
| 277.88 | 0.776 | 3.08 | -- | 0.309 | -0.413 | -- | -- | -0.284 | 6.47 | 68.96 | 1623 | -- | -- |
| 281.91 | 0.785 | 3.09 | -0.526 | -- | -- | -- | -- | -0.328 | -- | -- | -- | -- | -- |
| 283.31 | 0.787 | 3.08 | -- | 0.337 | -- | -- | -- | -0.276 | 6.23 | -- | -- | -- | -- |
| 281.23 | 0.781 | 3.08 | -- | -- | -0.544 | -- | -- | -0.246 | -- | 69.3 | 1950 | -- | -- |
| 289.21 | 0.794 | 3.08 | -- | -- | -- | -- | -- | -0.269 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 243.35 | wind | 5 | 4320 | < th | dose independent | rect. | 24 | 2 |
| 2 | 243.58 | wind | 5 | 4320 | > th | dose independent | rect. | 24 | 2 |
| 6 | 244.23 | wind | 5 | 4320 | > th | dose independent | rect. | 21 | 6 |
| 7 | 244.27 | wind | 5 | 4320 | < th | dose independent | rect. | 21 | 6 |
| 12 | 244.63 | wind | 5 | 4320 | > th | dose dependent | rect. | 22 | 2 |
| 18 | 244.86 | wind | 3 | 4320 | > th | dose dependent | rect. | 24 | 2 |
| 25 | 245.56 | wind | 5 | 4320 | > th | dose dependent | rect. | 21 | 6 |
| 119 | 248.65 | wind | 7 | 1440 | > th | dose dependent | rect. | 22 | 11 |
| 131 | 248.82 | wind | 9 | 1440 | < th | dose independent | rect. | 23 | 7 |
| 156 | 249.20 | wind | 7 | 1440 | > th | dose independent | rect. | 21 | 12 |
| 159 | 249.27 | wind | 7 | 1440 | < th | dose independent | rect. | 21 | 12 |
| 294 | 250.99 | wind | 3 | 90 | < th | dose independent | rect. | 19 | 2 |
| 302 | 251.02 | wind | 5 | 4320 | > th | dose independent | sin | 11 | NA |
| 312 | 251.11 | wind | 5 | 4320 | < th | dose independent | sin | 11 | NA |
| 381 | 251.72 | wind | 5 | 4320 | > th | dose dependent | sin | 11 | NA |
| 442 | 252.22 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 558 | 252.93 | humidity | 70 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 600 | 253.19 | wind | 7 | 4320 | > th | dose dependent | rect. | 17 | 18 |
| 603 | 253.21 | humidity | 70 | 1440 | < th | dose dependent | rect. | 12 | 4 |
| 651 | 253.42 | wind | 7 | 4320 | > th | dose independent | rect. | 15 | 20 |
| 662 | 253.46 | wind | 7 | 4320 | < th | dose independent | rect. | 15 | 20 |
| 817 | 253.94 | humidity | 70 | 1440 | < th | dose independent | rect. | 19 | 20 |
| 829 | 253.99 | humidity | 70 | 1440 | < th | dose independent | rect. | 6 | 9 |
| 850 | 254.03 | wind | 3 | 90 | < th | dose dependent | rect. | 19 | 2 |
| 858 | 254.06 | wind | 7 | 4320 | > th | dose independent | rect. | 17 | 6 |
| 872 | 254.10 | humidity | 70 | 1440 | < th | dose independent | rect. | 9 | 6 |
| 958 | 254.31 | humidity | 70 | 1440 | < th | dose independent | sin | 2 | NA |