Os02g0595800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Eukaryotic initiation factor 4B (Fragment).
FiT-DB / Search/ Help/ Sample detail
|
Os02g0595800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Eukaryotic initiation factor 4B (Fragment).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46.23 | 0.319 | 9.87 | 0.253 | 1.77 | -0.751 | 0.69 | 1.81 | 0.148 | 6.54 | 20.32 | 4671 | -- | -- |
| 49.47 | 0.328 | 9.92 | -0.122 | 1.76 | -0.801 | 0.678 | -- | 0.131 | 6.55 | 15.42 | 10825 | -- | -- |
| 47.41 | 0.321 | 9.88 | 0.263 | 1.77 | -0.76 | -- | 1.8 | 0.146 | 6.54 | 20.11 | 4617 | -- | -- |
| 50.42 | 0.331 | 9.92 | -0.0452 | 1.77 | -0.866 | -- | -- | 0.146 | 6.49 | 14.22 | 10726 | -- | -- |
| 190.97 | 0.644 | 9.89 | 0.634 | -- | -1.33 | -- | 3.31 | 0.236 | -- | 24.6 | 1982 | -- | -- |
| 62.16 | 0.37 | 9.98 | -0.592 | 1.77 | -- | 0.703 | -- | -0.144 | 6.59 | -- | -- | -- | -- |
| 63.41 | 0.373 | 9.98 | -0.582 | 1.78 | -- | -- | -- | -0.146 | 6.58 | -- | -- | -- | -- |
| 191.14 | 0.647 | 9.99 | -0.371 | -- | -1.22 | -- | -- | -0.00342 | -- | 24.6 | 1982 | -- | -- |
| 50.42 | 0.331 | 9.91 | -- | 1.78 | -0.925 | -- | -- | 0.156 | 6.51 | 13.21 | 10754 | -- | -- |
| 227.86 | 0.705 | 10 | -0.539 | -- | -- | -- | -- | -0.11 | -- | -- | -- | -- | -- |
| 72.32 | 0.398 | 9.97 | -- | 1.77 | -- | -- | -- | -0.0816 | 6.6 | -- | -- | -- | -- |
| 118.72 | 0.507 | 9.93 | -- | -- | -2 | -- | -- | 0.183 | -- | 24.2 | 457 | -- | -- |
| 235.51 | 0.716 | 10 | -- | -- | -- | -- | -- | -0.0504 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 41.43 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 5 | 41.76 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 34 | 42.87 | temperature | 15 | 720 | > th | dose dependent | sin | 8 | NA |
| 64 | 43.51 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 21 |
| 72 | 43.72 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 19 |
| 100 | 44.04 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 20 |
| 104 | 44.07 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 10 |
| 110 | 44.11 | temperature | 15 | 720 | > th | dose dependent | rect. | 16 | 18 |
| 137 | 44.28 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 150 | 44.35 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 8 |
| 152 | 44.36 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 173 | 44.41 | temperature | 15 | 1440 | > th | dose dependent | rect. | 2 | 5 |
| 218 | 44.51 | temperature | 30 | 1440 | < th | dose dependent | rect. | 2 | 5 |
| 224 | 44.52 | temperature | 30 | 1440 | < th | dose dependent | rect. | 24 | 7 |
| 273 | 44.60 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 3 |
| 387 | 44.78 | temperature | 25 | 720 | < th | dose dependent | rect. | 18 | 16 |
| 427 | 44.85 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 470 | 44.92 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 597 | 45.15 | temperature | 25 | 720 | < th | dose dependent | sin | 10 | NA |
| 628 | 45.20 | temperature | 30 | 720 | < th | dose dependent | sin | 7 | NA |
| 634 | 45.20 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 817 | 45.44 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 832 | 45.46 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 833 | 45.46 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 905 | 45.56 | temperature | 20 | 1440 | > th | dose independent | sin | 10 | NA |
| 916 | 45.57 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 15 |
| 921 | 45.58 | temperature | 25 | 4320 | < th | dose independent | rect. | 23 | 17 |
| 966 | 45.63 | temperature | 25 | 4320 | > th | dose independent | rect. | 23 | 17 |