Os02g0595400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0595400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 44.61 | 0.314 | 12.3 | 1.59 | 0.429 | -0.866 | 0.643 | -0.586 | 0.447 | 21.8 | 20 | 4357 | -- | -- |
| 44.45 | 0.311 | 12.3 | 1.6 | 0.43 | -0.689 | 0.647 | -- | 0.437 | 21.8 | 20.7 | 2951 | -- | -- |
| 46.16 | 0.316 | 12.3 | 1.56 | 0.426 | -0.885 | -- | -0.582 | 0.442 | 21.9 | 19.9 | 4503 | -- | -- |
| 46.07 | 0.316 | 12.3 | 1.57 | 0.423 | -0.702 | -- | -- | 0.434 | 21.7 | 20.54 | 2948 | -- | -- |
| 55.66 | 0.347 | 12.3 | 1.61 | -- | -0.786 | -- | -0.454 | 0.429 | -- | 20.9 | 3645 | -- | -- |
| 54.61 | 0.346 | 12.3 | 1.98 | 0.429 | -- | 0.679 | -- | 0.63 | 22 | -- | -- | -- | -- |
| 56.4 | 0.352 | 12.3 | 1.95 | 0.426 | -- | -- | -- | 0.628 | 21.9 | -- | -- | -- | -- |
| 50.29 | 0.33 | 12.3 | 1.76 | -- | -0.626 | -- | -- | 0.4 | -- | 25 | 804 | -- | -- |
| 53.89 | 0.342 | 12.4 | -- | 0.406 | -1.6 | -- | -- | -0.0185 | 21.9 | 19.1 | 47520 | -- | -- |
| 67.31 | 0.383 | 12.3 | 1.95 | -- | -- | -- | -- | 0.628 | -- | -- | -- | -- | -- |
| 156.62 | 0.585 | 12.3 | -- | 0.435 | -- | -- | -- | 0.411 | 22.3 | -- | -- | -- | -- |
| 63.48 | 0.371 | 12.4 | -- | -- | -1.6 | -- | -- | 0.0166 | -- | 18.61 | 47520 | -- | -- |
| 168.12 | 0.605 | 12.3 | -- | -- | -- | -- | -- | 0.412 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.73 | humidity | 70 | 43200 | < th | dose dependent | rect. | 24 | 8 |
| 2 | 42.74 | wind | 1 | 14400 | < th | dose independent | rect. | 21 | 10 |
| 3 | 42.75 | wind | 1 | 14400 | < th | dose independent | rect. | 21 | 12 |
| 7 | 42.83 | wind | 1 | 14400 | < th | dose dependent | rect. | 22 | 12 |
| 10 | 42.89 | wind | 1 | 14400 | > th | dose independent | rect. | 22 | 11 |
| 12 | 42.91 | wind | 1 | 14400 | < th | dose dependent | sin | 8 | NA |
| 25 | 43.02 | wind | 1 | 14400 | < th | dose independent | sin | 10 | NA |
| 101 | 43.36 | wind | 1 | 14400 | > th | dose independent | sin | 10 | NA |
| 112 | 43.41 | humidity | 70 | 43200 | > th | dose independent | rect. | 23 | 9 |
| 118 | 43.43 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 17 |
| 146 | 43.56 | wind | 1 | 14400 | < th | dose dependent | rect. | 5 | 4 |
| 155 | 43.58 | temperature | 20 | 4320 | < th | dose independent | rect. | 14 | 13 |
| 174 | 43.65 | humidity | 70 | 43200 | < th | dose independent | rect. | 24 | 7 |
| 175 | 43.65 | humidity | 60 | 43200 | < th | dose independent | rect. | 24 | 9 |
| 179 | 43.66 | temperature | 20 | 4320 | < th | dose independent | rect. | 11 | 16 |
| 183 | 43.68 | humidity | 70 | 43200 | > th | dose independent | rect. | 24 | 7 |
| 199 | 43.70 | temperature | 20 | 4320 | < th | dose independent | sin | 17 | NA |
| 203 | 43.71 | temperature | 20 | 4320 | > th | dose independent | rect. | 14 | 13 |
| 249 | 43.79 | temperature | 20 | 4320 | > th | dose independent | rect. | 11 | 16 |
| 276 | 43.85 | wind | 1 | 14400 | < th | dose independent | rect. | 23 | 4 |
| 290 | 43.87 | wind | 1 | 14400 | > th | dose independent | rect. | 5 | 4 |
| 306 | 43.89 | temperature | 20 | 4320 | > th | dose independent | sin | 16 | NA |
| 412 | 44.09 | wind | 3 | 14400 | < th | dose independent | rect. | 6 | 4 |
| 428 | 44.11 | humidity | 50 | 43200 | < th | dose dependent | rect. | 8 | 2 |
| 454 | 44.15 | wind | 1 | 14400 | > th | dose independent | rect. | 3 | 6 |
| 572 | 44.31 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 583 | 44.32 | humidity | 50 | 43200 | < th | dose dependent | rect. | 19 | 15 |
| 595 | 44.34 | temperature | 20 | 4320 | < th | dose independent | rect. | 6 | 21 |
| 614 | 44.36 | wind | 1 | 14400 | < th | dose dependent | rect. | 22 | 23 |
| 615 | 44.37 | temperature | 20 | 1440 | < th | dose independent | rect. | 2 | 5 |
| 624 | 44.37 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 23 |
| 636 | 44.38 | wind | 1 | 14400 | < th | dose dependent | rect. | 8 | 23 |
| 637 | 44.39 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 2 |
| 672 | 44.42 | temperature | 20 | 4320 | > th | dose independent | rect. | 6 | 22 |
| 735 | 44.49 | wind | 1 | 14400 | < th | dose dependent | no | NA | NA |
| 736 | 44.49 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 774 | 44.54 | radiation | 40 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 799 | 44.54 | radiation | 40 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 827 | 44.55 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 830 | 44.56 | wind | 1 | 14400 | < th | dose independent | rect. | 3 | 6 |
| 834 | 44.56 | temperature | 20 | 4320 | < th | dose independent | rect. | 14 | 22 |
| 890 | 44.61 | temperature | 20 | 4320 | > th | dose independent | rect. | 14 | 22 |
| 897 | 44.61 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 23 |
| 914 | 44.63 | temperature | 20 | 4320 | < th | dose independent | no | NA | NA |
| 979 | 44.67 | temperature | 20 | 4320 | > th | dose independent | no | NA | NA |
| 986 | 44.67 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 23 |
| 987 | 44.67 | temperature | 20 | 4320 | < th | dose independent | rect. | 23 | 23 |
| 994 | 44.68 | temperature | 20 | 4320 | < th | dose independent | rect. | 1 | 23 |