Os02g0593900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Methyltransferases-related family protein.
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Os02g0593900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Methyltransferases-related family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 56.24 | 0.352 | 7.9 | 0.635 | 0.271 | -2.14 | 0.0773 | 27.9 | 0.297 | 3.13 | 30.99 | 10 | -- | -- |
| 62.29 | 0.37 | 7.98 | -0.053 | 0.282 | 1.24 | 0.0394 | -- | 0.304 | 3.16 | 30.99 | 10 | -- | -- |
| 48.03 | 0.325 | -4480 | 27400 | 0.251 | -2070000 | -- | 12600000 | 0.28 | 3 | 34.6 | 10 | -- | -- |
| 47.9 | 0.324 | 7.99 | -0.0294 | 0.219 | 4.91 | -- | -- | 0.283 | 2.92 | 34.6 | 10 | -- | -- |
| 34610782468.36 | 8660 | -5740 | 19400 | -- | -2020000 | -- | 13400000 | 4500 | -- | 34.65 | 4 | -- | -- |
| 71.78 | 0.397 | 7.99 | -0.00525 | 0.179 | -- | -0.173 | -- | 0.272 | 3.25 | -- | -- | -- | -- |
| 71.86 | 0.397 | 7.99 | -0.00184 | 0.177 | -- | -- | -- | 0.273 | 3 | -- | -- | -- | -- |
| 50.64 | 0.333 | 7.99 | -0.0195 | -- | 4.81 | -- | -- | 0.288 | -- | 34.71 | 5 | -- | -- |
| 47.92 | 0.324 | 7.99 | -- | 0.218 | 4.91 | -- | -- | 0.286 | 2.92 | 34.82 | 3 | -- | -- |
| 73.67 | 0.401 | 7.99 | 0.00572 | -- | -- | -- | -- | 0.277 | -- | -- | -- | -- | -- |
| 71.86 | 0.397 | 7.99 | -- | 0.177 | -- | -- | -- | 0.273 | 3 | -- | -- | -- | -- |
| 50.65 | 0.333 | 7.99 | -- | -- | 4.8 | -- | -- | 0.29 | -- | 34.71 | 5 | -- | -- |
| 73.67 | 0.401 | 7.99 | -- | -- | -- | -- | -- | 0.277 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 46.76 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 12 | 2 |
| 5 | 47.20 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 14 | 1 |
| 10 | 47.38 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 12 | 1 |
| 16 | 47.81 | humidity | 50 | 90 | < th | dose independent | rect. | 13 | 1 |
| 18 | 47.81 | humidity | 50 | 90 | < th | dose dependent | rect. | 13 | 1 |
| 24 | 50.37 | temperature | 30 | 30 | > th | dose dependent | rect. | 12 | 2 |
| 27 | 50.41 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 10 | 5 |
| 51 | 52.34 | temperature | 30 | 90 | > th | dose dependent | rect. | 17 | 21 |
| 53 | 52.43 | temperature | 30 | 90 | > th | dose dependent | rect. | 8 | 6 |
| 73 | 53.06 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 9 | 5 |
| 74 | 53.11 | temperature | 30 | 270 | > th | dose dependent | sin | 9 | NA |
| 101 | 54.06 | temperature | 30 | 270 | > th | dose dependent | rect. | 10 | 1 |
| 104 | 54.20 | temperature | 30 | 10 | > th | dose dependent | rect. | 17 | 22 |
| 115 | 54.69 | temperature | 30 | 10 | > th | dose dependent | rect. | 9 | 6 |
| 148 | 54.75 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 10 | 1 |
| 254 | 55.63 | atmosphere | 1000 | 270 | < th | dose dependent | rect. | 10 | 1 |
| 260 | 55.87 | temperature | 30 | 270 | > th | dose independent | rect. | 10 | 1 |
| 264 | 56.00 | temperature | 30 | 90 | > th | dose dependent | sin | 4 | NA |
| 266 | 56.01 | temperature | 30 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 316 | 56.65 | temperature | 30 | 270 | > th | dose independent | rect. | 9 | 4 |
| 317 | 56.66 | temperature | 30 | 270 | > th | dose independent | rect. | 18 | 19 |
| 321 | 56.74 | temperature | 30 | 10 | > th | dose dependent | sin | 1 | NA |
| 345 | 56.96 | temperature | 30 | 270 | > th | dose independent | sin | 8 | NA |
| 352 | 57.09 | temperature | 30 | 10 | > th | dose dependent | rect. | 12 | 7 |
| 412 | 57.38 | temperature | 10 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 414 | 57.39 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 415 | 57.41 | temperature | 30 | 30 | > th | dose independent | rect. | 13 | 1 |
| 450 | 57.71 | temperature | 15 | 90 | > th | dose dependent | rect. | 8 | 23 |
| 456 | 57.84 | temperature | 30 | 10 | > th | dose dependent | no | NA | NA |
| 457 | 57.84 | temperature | 30 | 10 | > th | dose dependent | rect. | 9 | 10 |
| 582 | 58.00 | temperature | 20 | 270 | > th | dose dependent | rect. | 23 | 15 |
| 679 | 58.65 | temperature | 30 | 270 | < th | dose independent | sin | 9 | NA |
| 878 | 58.82 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 23 |