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Os02g0592700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.56 (0.025) R2 : 0.646
β1 : 2.02 (0.0915) R2dD : 0.393 R2D : 0.381
β2 : 1.07 (0.0593) R2dC : 0.254 R2C : 0.264
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.177 (0.0533) R2dN8 : 0.0114 R2N8 : -0.0128
σ : 0.47
deviance : 100.63
__
_____
C
peak time of C : 0.352
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
93.52 0.454 7.53 2.1 1.07 0.186 -0.116 -2.84 0.173 0.335 1000 7438 -- --
97.86 0.464 7.55 1.96 1.08 -0.314 -0.105 -- 0.197 0.362 1000 7438 -- --
93.57 0.451 7.53 2.1 1.07 0.201 -- -2.92 0.173 0.339 1000 7483 -- --
97.6 0.46 7.55 1.95 1.07 -0.319 -- -- 0.211 0.436 1000 13925 -- --
164.49 0.597 7.5 2.18 -- 0.119 -- -3 0.195 -- 1003 7210 -- --
100.56 0.47 7.56 2.01 1.07 -- -0.125 -- 0.176 0.349 -- -- -- --
100.63 0.47 7.56 2.02 1.07 -- -- -- 0.177 0.352 -- -- -- --
170.15 0.608 7.53 1.98 -- -0.305 -- -- 0.231 -- 999.7 13920 -- --
132.6 0.536 7.67 -- 1.12 -1.54 -- -- -0.242 1.11 1016 47520 -- --
172.61 0.614 7.54 2.05 -- -- -- -- 0.194 -- -- -- -- --
208.07 0.675 7.61 -- 1.1 -- -- -- -0.0482 0.448 -- -- -- --
197.36 0.654 7.67 -- -- -1.47 -- -- -0.388 -- 1016 47520 -- --
284 0.787 7.59 -- -- -- -- -- -0.0343 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 91.52 wind 1 43200 < th dose dependent rect. 8 9
5 92.18 wind 1 43200 < th dose dependent rect. 8 11
6 92.27 wind 3 43200 < th dose dependent rect. 16 1
11 92.37 wind 1 43200 < th dose independent rect. 7 4
15 92.46 wind 1 43200 < th dose independent rect. 5 12
17 92.47 wind 1 43200 > th dose independent rect. 5 12
19 92.50 wind 1 43200 < th dose dependent sin 23 NA
21 92.55 wind 1 43200 < th dose independent sin 0 NA
23 92.57 wind 1 43200 < th dose independent rect. 8 9
24 92.59 wind 1 43200 < th dose independent rect. 5 15
26 92.60 radiation 40 43200 > th dose independent rect. 14 18
29 92.63 radiation 40 43200 > th dose independent rect. 14 2
43 92.63 wind 1 43200 > th dose independent rect. 5 15
53 92.69 wind 1 43200 > th dose independent sin 1 NA
55 92.69 humidity 90 43200 < th dose dependent rect. 23 2
64 92.71 wind 1 43200 < th dose dependent rect. 11 5
89 92.79 wind 1 43200 < th dose independent rect. 14 2
91 92.80 wind 1 43200 > th dose independent rect. 8 9
104 92.87 atmosphere 1005 4320 > th dose independent rect. 9 1
128 93.02 atmosphere 1005 4320 < th dose independent rect. 9 1
129 93.02 wind 1 43200 > th dose independent rect. 14 2
135 93.05 wind 7 43200 > th dose dependent rect. 13 1
137 93.06 wind 1 43200 > th dose independent rect. 7 3
140 93.06 wind 1 43200 < th dose dependent rect. 5 17
141 93.07 wind 1 43200 < th dose independent rect. 5 21
153 93.11 wind 1 14400 < th dose independent rect. 1 2
167 93.17 wind 1 43200 < th dose dependent rect. 5 15
171 93.19 wind 9 43200 > th dose dependent rect. 11 3
181 93.24 wind 9 43200 > th dose independent rect. 13 1
182 93.24 wind 9 43200 < th dose independent rect. 13 1
210 93.28 atmosphere 1005 43200 > th dose independent rect. 6 1
239 93.35 humidity 90 43200 < th dose dependent rect. 22 7
242 93.37 temperature 25 720 < th dose independent rect. 24 8
249 93.38 wind 1 14400 < th dose dependent rect. 1 2
250 93.39 wind 1 10 > th dose independent rect. 4 16
275 93.43 wind 9 43200 > th dose dependent rect. 13 3
293 93.47 atmosphere 995 43200 > th dose independent rect. 18 6
316 93.48 wind 7 43200 < th dose dependent rect. 13 16
319 93.50 atmosphere 995 43200 < th dose independent rect. 18 6
327 93.51 atmosphere 995 43200 < th dose dependent rect. 16 9
328 93.51 wind 1 43200 > th dose dependent rect. 13 16
330 93.52 atmosphere 1000 14400 > th dose independent rect. 16 1
331 93.52 atmosphere 1005 43200 < th dose independent rect. 6 1
356 93.56 wind 1 14400 > th dose independent rect. 1 2
357 93.56 wind 1 43200 > th dose independent rect. 3 23
383 93.58 atmosphere 995 43200 < th dose dependent rect. 17 6
394 93.59 wind 1 43200 > th dose dependent rect. 15 12
404 93.60 wind 1 43200 < th dose dependent rect. 5 21
426 93.63 wind 9 43200 > th dose dependent rect. 15 1
427 93.63 radiation 10 43200 < th dose dependent rect. 7 3
428 93.63 wind 9 43200 < th dose dependent rect. 15 12
431 93.64 wind 1 270 > th dose independent rect. 4 1
469 93.68 radiation 10 43200 < th dose dependent rect. 6 5
487 93.71 atmosphere 995 43200 < th dose independent rect. 17 11
488 93.71 atmosphere 995 43200 > th dose independent rect. 17 12
493 93.72 atmosphere 1000 14400 < th dose independent rect. 16 1
536 93.76 temperature 25 270 > th dose independent rect. 1 7
537 93.76 atmosphere 995 43200 > th dose independent rect. 17 15
546 93.77 wind 3 43200 > th dose independent rect. 13 16
550 93.78 radiation 20 4320 < th dose independent rect. 21 9
557 93.78 wind 7 43200 < th dose dependent sin 15 NA
577 93.81 wind 1 43200 > th dose dependent sin 15 NA
585 93.81 radiation 40 43200 > th dose dependent rect. 14 18
589 93.82 atmosphere 995 43200 < th dose dependent rect. 18 4
595 93.83 temperature 25 4320 < th dose independent rect. 1 2
597 93.83 wind 3 43200 < th dose independent rect. 13 16
600 93.83 radiation 40 43200 > th dose dependent rect. 14 2
621 93.84 humidity 90 720 < th dose independent rect. 1 1
629 93.85 atmosphere 995 43200 < th dose independent sin 12 NA
635 93.85 wind 3 43200 > th dose independent rect. 10 18
640 93.86 atmosphere 995 43200 > th dose independent sin 12 NA
647 93.87 wind 1 43200 < th dose independent rect. 8 22
692 93.91 wind 1 43200 > th dose independent rect. 22 1
709 93.92 atmosphere 1000 14400 < th dose dependent rect. 3 1
726 93.93 wind 1 43200 > th dose independent rect. 23 21
729 93.93 wind 1 43200 > th dose dependent rect. 15 1
736 93.94 wind 3 43200 < th dose independent rect. 10 18
751 93.95 wind 9 43200 < th dose dependent rect. 15 1
800 93.98 atmosphere 1000 30 > th dose independent rect. 20 23
862 94.02 wind 9 4320 < th dose independent rect. 6 4
864 94.02 humidity 90 270 < th dose independent rect. 1 6
866 94.02 wind 1 43200 < th dose independent rect. 23 21
867 94.02 wind 1 43200 < th dose independent rect. 23 23
875 94.02 atmosphere 995 43200 < th dose dependent rect. 15 11
882 94.03 humidity 80 43200 > th dose independent rect. 21 17
890 94.03 wind 1 43200 > th dose dependent rect. 15 7
902 94.04 temperature 20 30 > th dose independent rect. 20 23
913 94.05 wind 3 43200 > th dose independent sin 16 NA
950 94.06 wind 9 43200 < th dose dependent rect. 15 7
968 94.07 wind 1 43200 > th dose independent rect. 8 23
971 94.07 atmosphere 995 43200 > th dose dependent rect. 7 1
987 94.08 atmosphere 1015 43200 < th dose dependent rect. 7 1
996 94.08 atmosphere 1005 4320 < th dose dependent rect. 21 12