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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0591500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.03 (0.0146) R2 : 0.00119
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0226 (0.0306) R2dN8 : 0.00153 R2N8 : 0.00119
σ : 0.274
deviance : 34.47
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
32.86 0.267 3.53 1.07 0.109 98 -0.0992 206 0.0236 6.65 15 90 -- --
32.92 0.269 3.02 0.0149 0.109 0.697 -0.0999 -- 0.0257 6.5 15 90 -- --
32.88 0.267 3.53 1.07 0.109 98.1 -- 206 0.024 6.8 15 90 -- --
32.94 0.269 3.02 0.0137 0.108 0.697 -- -- 0.0261 6.69 15 90 -- --
33.5 0.27 3.53 1.06 -- 98 -- 205 0.026 -- 14.98 90 -- --
33.85 0.273 3.03 -0.0125 0.107 -- -0.13 -- 0.0185 5.83 -- -- -- --
33.88 0.273 3.03 -0.013 0.107 -- -- -- 0.0191 6.28 -- -- -- --
33.55 0.271 3.03 0.0158 -- 0.686 -- -- 0.0282 -- 14.98 90 -- --
32.94 0.269 3.02 -- 0.108 0.69 -- -- 0.0246 6.68 14.7 92 -- --
34.47 0.274 3.03 -0.0101 -- -- -- -- 0.0214 -- -- -- -- --
33.88 0.272 3.03 -- 0.106 -- -- -- 0.0206 6.28 -- -- -- --
33.56 0.271 3.03 -- -- 0.678 -- -- 0.0264 -- 14.98 90 -- --
34.47 0.274 3.03 -- -- -- -- -- 0.0226 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 30.73 temperature 15.0 30 > th dose independent rect. 3 23
3 30.91 atmosphere 1005.0 90 > th dose dependent rect. 2 1
4 31.12 atmosphere 1005.0 10 > th dose dependent rect. 2 2
6 31.18 radiation 1.0 14400 < th dose dependent rect. 3 1
8 31.27 atmosphere 1000.0 30 > th dose independent rect. 3 23
18 31.30 wind 9.0 1440 < th dose independent rect. 3 1
19 31.30 temperature 10.0 1440 > th dose independent rect. 3 1
22 31.30 temperature 30.0 1440 < th dose independent rect. 3 1
26 31.30 humidity 50.0 1440 > th dose independent rect. 3 1
35 31.30 atmosphere 995.0 1440 > th dose independent rect. 3 1
36 31.30 radiation 1.0 1440 < th dose independent rect. 3 1
56 31.30 temperature 10.0 1440 > th dose independent rect. 4 23
68 31.31 temperature 20.0 30 > th dose dependent rect. 2 1
69 31.33 temperature 20.0 30 > th dose independent rect. 2 1
72 31.35 atmosphere 1005.0 30 > th dose independent rect. 2 1
74 31.35 atmosphere 995.0 30 > th dose dependent rect. 2 1
76 31.36 wind 3.0 30 < th dose independent rect. 2 1
78 31.36 wind 5.0 30 < th dose dependent rect. 2 1
82 31.37 humidity 80.0 30 > th dose independent rect. 2 1
87 31.37 humidity 70.0 30 > th dose dependent rect. 2 1
90 31.38 temperature 10.0 30 > th dose independent rect. 2 1
93 31.38 temperature 30.0 30 < th dose independent rect. 2 1
94 31.38 humidity 50.0 30 > th dose independent rect. 2 1
98 31.38 atmosphere 1010.0 30 < th dose independent rect. 2 1
100 31.38 radiation 1.0 30 < th dose independent rect. 2 1
105 31.38 precipitation 0.1 30 < th dose independent rect. 2 1
107 31.38 humidity 50.0 30 > th dose dependent rect. 2 1
109 31.38 radiation 1.0 30 < th dose dependent rect. 2 1
114 31.38 precipitation 0.1 30 < th dose dependent rect. 2 1
123 31.43 atmosphere 1015.0 30 < th dose dependent rect. 2 1
124 31.44 wind 1.0 30 > th dose independent rect. 2 1
126 31.46 temperature 30.0 30 < th dose dependent rect. 2 1
138 31.54 precipitation 0.1 30 < th dose independent rect. 3 23
141 31.54 precipitation 0.1 30 < th dose dependent rect. 3 23
203 31.93 humidity 50.0 30 > th dose independent rect. 3 23
204 31.94 humidity 90.0 90 < th dose independent rect. 2 1
207 31.96 wind 9.0 30 < th dose independent rect. 3 23
236 32.05 temperature 15.0 10 > th dose independent rect. 14 12
244 32.14 temperature 15.0 720 > th dose independent rect. 14 1
245 32.16 temperature 15.0 720 > th dose independent rect. 15 8
246 32.18 atmosphere 995.0 720 > th dose independent rect. 23 16
260 32.30 temperature 15.0 10 > th dose independent rect. 16 10
266 32.33 temperature 10.0 720 > th dose independent rect. 23 16
270 32.37 temperature 15.0 1440 > th dose independent rect. 21 1
272 32.40 temperature 10.0 720 > th dose independent rect. 3 8
273 32.40 atmosphere 995.0 720 > th dose independent rect. 3 8
274 32.40 radiation 40.0 720 < th dose independent rect. 15 8
275 32.40 temperature 10.0 720 > th dose independent rect. 11 16
278 32.42 temperature 15.0 10 > th dose independent rect. 21 23
280 32.43 wind 3.0 90 > th dose dependent rect. 4 1
282 32.45 humidity 50.0 720 > th dose independent rect. 3 8
285 32.46 humidity 90.0 90 < th dose independent rect. 1 5
287 32.46 temperature 10.0 720 > th dose dependent rect. 14 1
288 32.47 wind 3.0 90 > th dose independent rect. 4 1
289 32.47 humidity 90.0 1440 > th dose independent rect. 12 1
295 32.50 wind 9.0 720 < th dose independent rect. 3 8
296 32.50 precipitation 0.1 720 < th dose independent rect. 15 8
298 32.50 temperature 30.0 30 < th dose independent rect. 3 23
299 32.50 humidity 90.0 1440 > th dose dependent rect. 12 1
302 32.50 precipitation 0.1 720 < th dose dependent rect. 15 8
305 32.53 humidity 90.0 1440 < th dose independent rect. 12 1
307 32.53 temperature 15.0 30 > th dose independent rect. 11 23
312 32.55 precipitation 0.1 720 < th dose independent rect. 3 16
313 32.55 precipitation 0.1 720 < th dose independent rect. 23 16
316 32.55 temperature 20.0 270 < th dose dependent rect. 4 2
317 32.55 precipitation 0.1 720 < th dose dependent rect. 3 16
318 32.55 precipitation 0.1 720 < th dose dependent rect. 23 16
320 32.56 precipitation 0.1 720 < th dose independent rect. 7 8
326 32.56 precipitation 0.1 720 < th dose dependent rect. 7 8
330 32.58 temperature 15.0 720 > th dose independent rect. 17 8
340 32.60 wind 3.0 30 < th dose dependent rect. 2 11
342 32.61 atmosphere 995.0 720 > th dose independent rect. 15 8
344 32.61 temperature 20.0 270 < th dose dependent rect. 4 5
349 32.63 atmosphere 995.0 720 > th dose independent rect. 7 8
352 32.64 humidity 90.0 720 < th dose independent rect. 14 1
353 32.64 humidity 90.0 90 < th dose independent rect. 1 20
360 32.65 temperature 15.0 30 > th dose independent rect. 23 3
364 32.66 atmosphere 1010.0 10 < th dose independent rect. 14 12
372 32.67 atmosphere 1010.0 720 < th dose independent rect. 14 1
374 32.67 wind 9.0 720 < th dose independent rect. 15 8
383 32.68 temperature 15.0 720 > th dose independent rect. 12 7
384 32.68 precipitation 0.1 720 < th dose independent rect. 19 8
388 32.68 precipitation 0.1 720 < th dose dependent rect. 19 8
397 32.69 radiation 1.0 720 > th dose independent rect. 14 1
420 32.71 temperature 15.0 270 > th dose independent rect. 21 12
432 32.72 temperature 15.0 720 > th dose independent rect. 7 8
433 32.72 temperature 15.0 10 > th dose independent rect. 10 16
445 32.72 radiation 10.0 30 < th dose dependent rect. 3 23
471 32.73 temperature 15.0 720 < th dose dependent rect. 22 3
488 32.74 temperature 15.0 720 < th dose independent rect. 18 7
495 32.74 radiation 40.0 720 < th dose independent rect. 15 16
497 32.74 humidity 90.0 90 < th dose dependent rect. 2 1
501 32.74 wind 3.0 30 < th dose dependent rect. 2 8
504 32.75 precipitation 0.1 1440 > th dose independent rect. 12 1
509 32.75 temperature 15.0 720 < th dose independent rect. 21 4
512 32.75 humidity 80.0 1440 > th dose independent rect. 8 6
513 32.75 wind 9.0 720 < th dose independent rect. 19 8
514 32.75 precipitation 0.1 1440 > th dose dependent rect. 12 1
528 32.76 atmosphere 1015.0 720 < th dose independent rect. 7 8
529 32.76 temperature 15.0 1440 > th dose independent rect. 11 10
532 32.76 atmosphere 1005.0 30 > th dose independent rect. 4 15
533 32.76 temperature 10.0 720 > th dose independent rect. 15 16
544 32.77 temperature 15.0 10 > th dose independent rect. 8 18
554 32.78 precipitation 0.1 720 > th dose independent rect. 14 2
556 32.78 temperature 10.0 720 > th dose independent rect. 19 8
557 32.78 temperature 30.0 720 < th dose independent rect. 19 8
558 32.78 humidity 50.0 720 > th dose independent rect. 19 8
559 32.78 atmosphere 995.0 720 > th dose independent rect. 19 8
560 32.78 radiation 1.0 720 < th dose independent rect. 19 8
568 32.78 temperature 10.0 720 > th dose independent rect. 3 16
569 32.78 atmosphere 995.0 720 > th dose independent rect. 3 16
572 32.78 temperature 20.0 1440 < th dose dependent rect. 12 2
573 32.78 precipitation 0.1 720 > th dose dependent rect. 14 2
577 32.78 radiation 1.0 720 < th dose dependent rect. 19 8
585 32.78 wind 9.0 30 < th dose dependent rect. 3 23
588 32.79 humidity 80.0 1440 < th dose independent rect. 8 6
591 32.79 temperature 10.0 720 > th dose dependent rect. 2 1
617 32.80 precipitation 0.1 720 < th dose independent rect. 3 8
629 32.80 humidity 70.0 1440 > th dose dependent rect. 8 6
631 32.80 precipitation 0.1 720 < th dose dependent rect. 3 8
637 32.80 atmosphere 995.0 30 > th dose dependent rect. 4 15
663 32.82 atmosphere 1015.0 1440 < th dose independent rect. 24 6
672 32.82 atmosphere 1010.0 10 < th dose independent rect. 16 10
677 32.82 temperature 15.0 30 > th dose independent rect. 1 23
678 32.82 temperature 15.0 30 > th dose independent rect. 9 23
679 32.82 temperature 20.0 270 < th dose dependent sin 2 NA
690 32.82 wind 3.0 30 < th dose dependent rect. 2 6
696 32.82 humidity 60.0 1440 > th dose dependent rect. 4 10
705 32.83 humidity 90.0 90 < th dose independent rect. 1 9
708 32.83 atmosphere 995.0 720 > th dose independent rect. 15 16
709 32.83 temperature 15.0 10 > th dose independent rect. 23 23
711 32.83 atmosphere 1015.0 30 < th dose independent rect. 3 23
713 32.83 temperature 15.0 30 > th dose dependent rect. 23 3
719 32.83 temperature 20.0 270 < th dose dependent rect. 19 11
729 32.84 temperature 15.0 90 > th dose independent sin 7 NA
730 32.84 humidity 80.0 10 > th dose independent rect. 10 1
739 32.84 atmosphere 995.0 720 > th dose independent rect. 3 23
740 32.84 wind 1.0 14400 < th dose dependent rect. 6 1
742 32.84 temperature 15.0 4320 < th dose dependent rect. 4 1
743 32.84 humidity 80.0 10 > th dose dependent rect. 10 1
752 32.85 temperature 15.0 270 > th dose independent sin 9 NA
753 32.85 temperature 15.0 90 > th dose independent sin 18 NA
754 32.85 temperature 15.0 270 > th dose independent sin 21 NA
756 32.85 wind 1.0 720 > th dose independent rect. 15 8
757 32.85 atmosphere 1015.0 720 < th dose independent rect. 3 8
759 32.85 atmosphere 1000.0 10 > th dose independent rect. 14 12
765 32.85 temperature 20.0 720 < th dose dependent rect. 17 1
787 32.86 temperature 15.0 90 > th dose independent no NA NA
789 32.86 temperature 15.0 90 < th dose independent sin 7 NA
837 32.86 temperature 15.0 90 < th dose independent no NA NA
839 32.86 temperature 20.0 270 < th dose independent rect. 5 1
840 32.86 temperature 15.0 1440 < th dose independent rect. 5 1
842 32.86 temperature 15.0 1440 < th dose independent rect. 9 1
845 32.86 humidity 90.0 720 < th dose independent rect. 2 1
846 32.86 atmosphere 1015.0 1440 > th dose independent rect. 1 1
861 32.86 radiation 1.0 720 < th dose independent rect. 12 2
877 32.86 atmosphere 1010.0 30 < th dose independent rect. 23 3
989 32.86 temperature 15.0 270 < th dose independent rect. 24 10