Os02g0590800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
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Os02g0590800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 49.99 | 0.332 | 13 | -0.981 | 1.92 | 0.235 | 0.0744 | 2.44 | -0.0177 | 2.85 | 47.29 | 428 | -- | -- |
| 56.24 | 0.349 | 13 | -0.839 | 1.92 | 0.39 | 0.586 | -- | 0.00477 | 2.78 | 46.27 | 446 | -- | -- |
| 50 | 0.329 | 13 | -0.982 | 1.92 | 0.235 | -- | 2.53 | -0.0175 | 2.85 | 45.03 | 424 | -- | -- |
| 57.44 | 0.353 | 13 | -0.858 | 1.85 | 0.508 | -- | -- | 0.00319 | 2.71 | 44.17 | 403 | -- | -- |
| 139.25 | 0.55 | 13 | -1.05 | -- | 1.67 | -- | 1.29 | 0.121 | -- | 64.73 | 115 | -- | -- |
| 58.26 | 0.358 | 13 | -0.855 | 2.06 | -- | 0.827 | -- | -0.00358 | 3.08 | -- | -- | -- | -- |
| 60.5 | 0.364 | 13 | -0.873 | 2.06 | -- | -- | -- | -0.00832 | 3.05 | -- | -- | -- | -- |
| 143.33 | 0.558 | 13 | -0.869 | -- | 1.75 | -- | -- | 0.117 | -- | 64.32 | 119 | -- | -- |
| 76.89 | 0.408 | 13 | -- | 1.87 | 0.511 | -- | -- | 0.101 | 2.64 | 38.5 | 476 | -- | -- |
| 303.16 | 0.814 | 13 | -0.785 | -- | -- | -- | -- | 0.0453 | -- | -- | -- | -- | -- |
| 80.58 | 0.42 | 13 | -- | 2.04 | -- | -- | -- | 0.0889 | 3.05 | -- | -- | -- | -- |
| 162.72 | 0.594 | 13 | -- | -- | 1.73 | -- | -- | 0.193 | -- | 63.64 | 119 | -- | -- |
| 319.42 | 0.834 | 13 | -- | -- | -- | -- | -- | 0.132 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.68 | temperature | 15.0 | 270 | > th | dose independent | rect. | 8 | 13 |
| 2 | 45.74 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 14 |
| 5 | 46.30 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 13 |
| 6 | 46.30 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 13 |
| 8 | 46.75 | wind | 9.0 | 270 | < th | dose independent | rect. | 12 | 13 |
| 9 | 46.89 | wind | 7.0 | 270 | < th | dose independent | rect. | 21 | 11 |
| 10 | 47.03 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 11 |
| 11 | 47.03 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 11 |
| 13 | 47.12 | radiation | 30.0 | 270 | < th | dose independent | rect. | 21 | 11 |
| 14 | 47.12 | humidity | 50.0 | 720 | > th | dose independent | rect. | 9 | 20 |
| 15 | 47.15 | temperature | 15.0 | 270 | > th | dose independent | rect. | 1 | 11 |
| 17 | 47.17 | humidity | 70.0 | 270 | > th | dose independent | rect. | 21 | 11 |
| 20 | 47.25 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 11 |
| 21 | 47.25 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 11 |
| 22 | 47.25 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 11 |
| 24 | 47.25 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 11 |
| 26 | 47.26 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 8 | 13 |
| 28 | 47.33 | humidity | 80.0 | 720 | > th | dose independent | rect. | 3 | 12 |
| 29 | 47.42 | humidity | 50.0 | 720 | > th | dose independent | rect. | 17 | 20 |
| 32 | 47.46 | humidity | 80.0 | 720 | > th | dose independent | rect. | 4 | 10 |
| 41 | 47.65 | wind | 9.0 | 720 | < th | dose independent | rect. | 21 | 20 |
| 51 | 47.70 | radiation | 10.0 | 720 | < th | dose independent | rect. | 17 | 4 |
| 52 | 47.72 | humidity | 60.0 | 270 | > th | dose independent | rect. | 17 | 4 |
| 55 | 47.73 | humidity | 80.0 | 720 | < th | dose independent | sin | 4 | NA |
| 57 | 47.74 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 11 |
| 58 | 47.74 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 11 |
| 59 | 47.74 | temperature | 10.0 | 270 | > th | dose independent | rect. | 12 | 13 |
| 60 | 47.77 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 21 | 11 |
| 61 | 47.79 | radiation | 10.0 | 720 | < th | dose independent | rect. | 17 | 12 |
| 62 | 47.79 | wind | 1.0 | 270 | > th | dose independent | rect. | 12 | 13 |
| 64 | 47.81 | humidity | 50.0 | 720 | > th | dose independent | rect. | 9 | 11 |
| 66 | 47.83 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 4 |
| 69 | 47.89 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 11 |
| 71 | 47.90 | humidity | 50.0 | 720 | > th | dose independent | rect. | 24 | 21 |
| 72 | 47.92 | humidity | 60.0 | 270 | > th | dose independent | rect. | 17 | 12 |
| 73 | 47.95 | humidity | 80.0 | 720 | > th | dose independent | sin | 3 | NA |
| 75 | 47.99 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 19 | 10 |
| 77 | 48.04 | wind | 9.0 | 720 | < th | dose independent | rect. | 5 | 19 |
| 80 | 48.06 | radiation | 10.0 | 720 | < th | dose independent | rect. | 17 | 10 |
| 84 | 48.15 | humidity | 80.0 | 720 | < th | dose independent | rect. | 24 | 14 |
| 88 | 48.16 | humidity | 50.0 | 720 | > th | dose independent | rect. | 1 | 19 |
| 89 | 48.17 | humidity | 80.0 | 720 | < th | dose independent | rect. | 3 | 11 |
| 92 | 48.20 | wind | 9.0 | 720 | < th | dose independent | rect. | 5 | 12 |
| 96 | 48.23 | wind | 7.0 | 720 | < th | dose independent | rect. | 12 | 5 |
| 107 | 48.29 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 11 |
| 108 | 48.29 | humidity | 70.0 | 10 | > th | dose independent | rect. | 18 | 12 |
| 109 | 48.29 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 3 | 12 |
| 118 | 48.35 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 11 |
| 119 | 48.35 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 11 |
| 125 | 48.38 | humidity | 50.0 | 720 | > th | dose independent | rect. | 17 | 10 |
| 129 | 48.40 | humidity | 50.0 | 720 | > th | dose independent | rect. | 15 | 14 |
| 133 | 48.42 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 16 | 5 |
| 137 | 48.43 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 21 | 20 |
| 138 | 48.43 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 21 | 20 |
| 156 | 48.50 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 17 | 14 |
| 160 | 48.52 | wind | 9.0 | 720 | < th | dose independent | rect. | 3 | 14 |
| 166 | 48.54 | radiation | 1.0 | 720 | > th | dose independent | rect. | 9 | 4 |
| 173 | 48.56 | radiation | 20.0 | 720 | < th | dose dependent | rect. | 17 | 12 |
| 193 | 48.61 | wind | 1.0 | 270 | > th | dose independent | rect. | 21 | 10 |
| 214 | 48.66 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 3 | 14 |
| 218 | 48.66 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 3 | 14 |
| 223 | 48.67 | radiation | 20.0 | 720 | < th | dose dependent | rect. | 17 | 10 |
| 234 | 48.71 | radiation | 1.0 | 720 | < th | dose dependent | sin | 1 | NA |
| 240 | 48.72 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 17 | 4 |
| 244 | 48.73 | humidity | 60.0 | 720 | > th | dose dependent | sin | 3 | NA |
| 272 | 48.80 | wind | 9.0 | 720 | < th | dose independent | rect. | 5 | 10 |
| 274 | 48.80 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 5 | 12 |
| 276 | 48.80 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 5 | 12 |
| 277 | 48.80 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 17 | 19 |
| 285 | 48.82 | humidity | 90.0 | 720 | < th | dose dependent | sin | 4 | NA |
| 291 | 48.84 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 5 | 4 |
| 292 | 48.84 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 12 | 5 |
| 295 | 48.84 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 5 | 4 |
| 296 | 48.84 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 12 | 5 |
| 306 | 48.86 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 14 |
| 313 | 48.89 | humidity | 70.0 | 10 | > th | dose independent | rect. | 18 | 5 |
| 329 | 48.93 | radiation | 10.0 | 270 | < th | dose independent | rect. | 14 | 7 |
| 335 | 48.95 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 24 | 5 |
| 353 | 49.00 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 8 | 13 |
| 355 | 49.00 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 8 | 13 |
| 356 | 49.00 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 19 | 18 |
| 357 | 49.01 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 12 |
| 364 | 49.02 | radiation | 1.0 | 720 | < th | dose independent | rect. | 24 | 8 |
| 367 | 49.03 | wind | 7.0 | 720 | < th | dose independent | rect. | 5 | 4 |
| 400 | 49.10 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 24 | 15 |
| 405 | 49.12 | temperature | 10.0 | 720 | > th | dose independent | rect. | 5 | 4 |
| 406 | 49.12 | humidity | 50.0 | 720 | > th | dose independent | rect. | 5 | 4 |
| 407 | 49.12 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 5 | 4 |
| 408 | 49.12 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 5 | 4 |
| 410 | 49.12 | temperature | 10.0 | 720 | > th | dose independent | rect. | 9 | 20 |
| 417 | 49.14 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 24 | 7 |
| 426 | 49.16 | wind | 9.0 | 720 | < th | dose independent | rect. | 14 | 10 |
| 433 | 49.17 | radiation | 40.0 | 720 | < th | dose independent | rect. | 5 | 4 |
| 441 | 49.18 | temperature | 20.0 | 90 | > th | dose independent | rect. | 3 | 10 |
| 452 | 49.20 | temperature | 10.0 | 720 | > th | dose independent | rect. | 17 | 4 |
| 458 | 49.20 | temperature | 10.0 | 720 | > th | dose independent | rect. | 21 | 20 |
| 470 | 49.23 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 17 | 4 |
| 471 | 49.23 | radiation | 20.0 | 720 | < th | dose dependent | rect. | 17 | 2 |
| 485 | 49.26 | radiation | 40.0 | 720 | < th | dose independent | rect. | 17 | 19 |
| 503 | 49.29 | radiation | 40.0 | 720 | < th | dose independent | rect. | 1 | 11 |
| 547 | 49.35 | wind | 9.0 | 270 | < th | dose independent | rect. | 8 | 13 |
| 562 | 49.38 | wind | 1.0 | 90 | > th | dose independent | rect. | 5 | 13 |
| 591 | 49.43 | wind | 1.0 | 270 | > th | dose independent | rect. | 8 | 13 |
| 609 | 49.45 | temperature | 10.0 | 720 | > th | dose independent | rect. | 12 | 5 |
| 610 | 49.45 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 12 | 5 |
| 612 | 49.45 | temperature | 10.0 | 720 | > th | dose independent | rect. | 17 | 19 |
| 615 | 49.46 | wind | 1.0 | 720 | > th | dose independent | rect. | 12 | 5 |
| 643 | 49.50 | temperature | 20.0 | 90 | > th | dose independent | rect. | 19 | 18 |
| 651 | 49.51 | wind | 9.0 | 720 | < th | dose independent | rect. | 24 | 5 |
| 652 | 49.51 | temperature | 10.0 | 720 | > th | dose independent | rect. | 24 | 5 |
| 654 | 49.51 | temperature | 30.0 | 720 | < th | dose independent | rect. | 24 | 5 |
| 655 | 49.51 | humidity | 50.0 | 720 | > th | dose independent | rect. | 24 | 5 |
| 658 | 49.51 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 24 | 5 |
| 666 | 49.51 | temperature | 10.0 | 720 | > th | dose independent | rect. | 5 | 19 |
| 692 | 49.55 | wind | 9.0 | 720 | < th | dose independent | rect. | 13 | 20 |
| 715 | 49.58 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 12 |
| 716 | 49.58 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 12 |
| 717 | 49.58 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 12 |
| 726 | 49.59 | wind | 9.0 | 720 | < th | dose independent | rect. | 19 | 15 |
| 735 | 49.60 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 14 |
| 736 | 49.60 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 24 | 14 |
| 781 | 49.67 | wind | 9.0 | 720 | < th | dose independent | rect. | 17 | 4 |
| 790 | 49.67 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 2 | 19 |
| 792 | 49.68 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 5 | 10 |
| 798 | 49.68 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 5 | 10 |
| 809 | 49.70 | radiation | 1.0 | 720 | > th | dose independent | rect. | 13 | 20 |
| 844 | 49.73 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 3 | 16 |
| 861 | 49.74 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 3 |
| 864 | 49.75 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 20 | 11 |
| 867 | 49.75 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 20 | 11 |
| 871 | 49.75 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 20 | 11 |
| 876 | 49.75 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 20 | 11 |
| 877 | 49.75 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 20 | 11 |
| 882 | 49.75 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 13 |
| 885 | 49.75 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 12 | 13 |
| 886 | 49.76 | radiation | 1.0 | 720 | < th | dose independent | sin | 1 | NA |
| 889 | 49.76 | temperature | 10.0 | 720 | > th | dose independent | rect. | 10 | 9 |
| 890 | 49.76 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 10 | 9 |
| 892 | 49.76 | temperature | 10.0 | 720 | > th | dose independent | rect. | 19 | 15 |
| 893 | 49.76 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 19 | 15 |
| 894 | 49.76 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 20 |
| 908 | 49.78 | humidity | 50.0 | 720 | > th | dose independent | rect. | 24 | 13 |
| 913 | 49.78 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 20 | 4 |
| 916 | 49.79 | radiation | 10.0 | 270 | < th | dose independent | sin | 16 | NA |
| 941 | 49.83 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 23 | 10 |
| 947 | 49.83 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 23 | 10 |
| 949 | 49.84 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 6 |
| 951 | 49.84 | radiation | 1.0 | 720 | < th | dose independent | rect. | 1 | 20 |
| 968 | 49.85 | humidity | 50.0 | 720 | > th | dose independent | rect. | 19 | 15 |
| 979 | 49.86 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 18 | 5 |
| 996 | 49.89 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 4 |