Os02g0589700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Lecithin:cholesterol acyltransferase family protein.
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Os02g0589700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Lecithin:cholesterol acyltransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 231.69 | 0.715 | 3.46 | -0.3 | 0.505 | 1.24 | -1.02 | 2.41 | 0.259 | 9.25 | 29.81 | 1257 | -- | -- |
| 236.74 | 0.717 | 3.4 | 0.206 | 0.521 | 1.18 | -0.907 | -- | 0.352 | 9.05 | 32.4 | 1250 | -- | -- |
| 234.88 | 0.714 | 3.46 | -0.314 | 0.554 | 1.21 | -- | 2.33 | 0.249 | 9.17 | 30.51 | 1416 | -- | -- |
| 239.54 | 0.721 | 3.4 | 0.185 | 0.501 | 1.21 | -- | -- | 0.361 | 8.98 | 32.11 | 1223 | -- | -- |
| 242.34 | 0.725 | 3.43 | -0.0376 | -- | 1.51 | -- | 1.2 | 0.343 | -- | 31.4 | 764 | -- | -- |
| 259.93 | 0.756 | 3.45 | -0.16 | 0.564 | -- | -0.816 | -- | 0.128 | 9.8 | -- | -- | -- | -- |
| 262.48 | 0.759 | 3.45 | -0.191 | 0.567 | -- | -- | -- | 0.127 | 9.82 | -- | -- | -- | -- |
| 243.54 | 0.727 | 3.41 | 0.204 | -- | 1.55 | -- | -- | 0.375 | -- | 33 | 743 | -- | -- |
| 240.22 | 0.722 | 3.41 | -- | 0.5 | 1.11 | -- | -- | 0.327 | 9.06 | 32.18 | 1221 | -- | -- |
| 281.71 | 0.784 | 3.47 | -0.197 | -- | -- | -- | -- | 0.127 | -- | -- | -- | -- | -- |
| 263.44 | 0.759 | 3.45 | -- | 0.568 | -- | -- | -- | 0.148 | 9.84 | -- | -- | -- | -- |
| 244.52 | 0.728 | 3.42 | -- | -- | 1.47 | -- | -- | 0.34 | -- | 33.3 | 738 | -- | -- |
| 282.73 | 0.785 | 3.46 | -- | -- | -- | -- | -- | 0.149 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 225.38 | temperature | 20 | 4320 | > th | dose dependent | rect. | 2 | 1 |
| 8 | 226.43 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 9 |
| 11 | 226.52 | temperature | 25 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 15 | 226.55 | humidity | 70 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 25 | 226.92 | temperature | 25 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 37 | 227.11 | temperature | 30 | 1440 | < th | dose dependent | rect. | 24 | 10 |
| 38 | 227.13 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 63 | 227.32 | humidity | 70 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 140 | 227.86 | temperature | 20 | 4320 | < th | dose independent | rect. | 2 | 1 |
| 144 | 227.90 | temperature | 20 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 145 | 227.90 | radiation | 1 | 4320 | < th | dose dependent | rect. | 1 | 4 |
| 158 | 228.01 | temperature | 25 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 179 | 228.12 | temperature | 20 | 1440 | > th | dose dependent | sin | 8 | NA |
| 210 | 228.24 | wind | 9 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 241 | 228.39 | temperature | 25 | 4320 | < th | dose dependent | rect. | 2 | 1 |
| 257 | 228.48 | wind | 9 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 264 | 228.50 | temperature | 30 | 1440 | < th | dose dependent | sin | 7 | NA |
| 296 | 228.63 | temperature | 20 | 4320 | > th | dose independent | rect. | 2 | 1 |
| 340 | 228.78 | wind | 1 | 43200 | < th | dose dependent | rect. | 15 | 4 |
| 345 | 228.80 | wind | 1 | 43200 | > th | dose independent | rect. | 16 | 3 |
| 362 | 228.87 | wind | 1 | 43200 | < th | dose independent | rect. | 16 | 3 |
| 370 | 228.89 | temperature | 25 | 1440 | > th | dose independent | rect. | 6 | 6 |
| 383 | 228.92 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 2 |
| 404 | 228.99 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 22 |
| 447 | 229.13 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 598 | 229.46 | temperature | 20 | 14400 | < th | dose dependent | rect. | 22 | 6 |
| 627 | 229.52 | temperature | 25 | 4320 | < th | dose independent | rect. | 18 | 16 |
| 647 | 229.55 | temperature | 25 | 1440 | < th | dose independent | rect. | 1 | 11 |
| 734 | 229.71 | radiation | 20 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 762 | 229.73 | radiation | 30 | 4320 | < th | dose dependent | rect. | 16 | 1 |
| 787 | 229.78 | temperature | 30 | 4320 | < th | dose independent | rect. | 13 | 2 |
| 795 | 229.79 | radiation | 10 | 4320 | < th | dose dependent | rect. | 16 | 13 |
| 798 | 229.81 | radiation | 1 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 800 | 229.81 | radiation | 1 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 804 | 229.82 | temperature | 25 | 1440 | < th | dose independent | rect. | 6 | 6 |
| 810 | 229.83 | temperature | 25 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 841 | 229.89 | radiation | 1 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 918 | 230.05 | radiation | 1 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 969 | 230.12 | temperature | 25 | 4320 | > th | dose independent | rect. | 18 | 17 |
| 974 | 230.13 | radiation | 20 | 4320 | < th | dose independent | rect. | 15 | 2 |
| 981 | 230.13 | temperature | 20 | 14400 | < th | dose dependent | rect. | 22 | 18 |
| 995 | 230.15 | temperature | 20 | 14400 | < th | dose dependent | rect. | 12 | 17 |
| 997 | 230.15 | temperature | 20 | 14400 | < th | dose dependent | rect. | 22 | 21 |