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Os02g0588700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13 (0.0214) R2 : 0.655
β1 : 1.61 (0.0784) R2dD : 0.334 R2D : 0.193
β2 : 0.947 (0.0556) R2dC : 0.221 R2C : 0.192
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.673 (0.0457) R2dN8 : 0.22 R2N8 : 0.0893
σ : 0.402
deviance : 73.86
__
_____
C
peak time of C : 5.12
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
58.7 0.36 13.2 0.153 0.98 -0.632 1.09 8.39 0.532 5.16 29.86 4491 -- --
67.78 0.383 13 1.3 0.949 -0.579 1.18 -- 0.61 5.3 14.2 33185 -- --
60.71 0.363 13.2 0.0835 0.977 -0.596 -- 8.13 0.498 5.07 29.75 4852 -- --
70.56 0.391 13 1.25 0.967 -0.598 -- -- 0.567 5.2 14.2 33334 -- --
110.3 0.489 13.2 0.26 -- -0.506 -- 7.49 0.536 -- 29.7 4903 -- --
71.1 0.395 13 1.61 0.941 -- 1.06 -- 0.678 5.25 -- -- -- --
73.86 0.402 13 1.61 0.947 -- -- -- 0.673 5.12 -- -- -- --
110.24 0.491 13 1.73 -- 0.399 -- -- 0.73 -- 29 1982 -- --
82.23 0.422 13.1 -- 0.897 -1.33 -- -- 0.261 4.95 17.2 33495 -- --
120.9 0.514 13 1.65 -- -- -- -- 0.697 -- -- -- -- --
142.59 0.559 13.1 -- 0.976 -- -- -- 0.493 5.06 -- -- -- --
127.67 0.526 13.1 -- -- -1.42 -- -- 0.24 -- 17.3 32946 -- --
192.58 0.648 13.1 -- -- -- -- -- 0.514 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 55.39 humidity 60.0 14400 < th dose dependent rect. 16 17
2 55.70 humidity 60.0 14400 < th dose dependent rect. 16 4
19 56.21 humidity 50.0 14400 > th dose independent rect. 16 19
23 56.59 humidity 50.0 14400 > th dose independent rect. 15 15
38 56.62 humidity 50.0 14400 > th dose independent rect. 15 9
46 56.66 humidity 50.0 14400 > th dose independent rect. 15 2
53 56.74 humidity 60.0 14400 < th dose independent rect. 17 2
55 56.82 humidity 50.0 14400 > th dose independent sin 11 NA
57 56.88 humidity 50.0 14400 < th dose independent rect. 16 19
81 56.95 humidity 50.0 14400 < th dose independent sin 11 NA
82 56.95 humidity 60.0 14400 < th dose dependent sin 12 NA
90 57.17 humidity 60.0 14400 > th dose independent rect. 17 2
93 57.21 humidity 60.0 14400 < th dose independent rect. 12 1
95 57.24 humidity 60.0 14400 < th dose independent rect. 17 16
101 57.30 humidity 60.0 14400 > th dose independent rect. 17 13
102 57.30 humidity 60.0 14400 > th dose independent rect. 17 21
103 57.31 humidity 60.0 14400 > th dose independent rect. 17 9
104 57.31 humidity 60.0 14400 > th dose independent rect. 17 11
106 57.32 humidity 60.0 14400 > th dose independent rect. 17 7
110 57.32 humidity 60.0 14400 < th dose independent rect. 16 22
117 57.37 humidity 50.0 14400 < th dose independent rect. 15 3
145 57.44 radiation 20.0 43200 < th dose dependent rect. 9 1
147 57.48 humidity 60.0 14400 > th dose independent rect. 12 1
160 57.50 radiation 1.0 90 < th dose dependent sin 13 NA
162 57.52 humidity 60.0 14400 < th dose independent rect. 12 8
177 57.55 humidity 60.0 14400 < th dose independent rect. 12 21
202 57.71 radiation 1.0 90 < th dose independent sin 12 NA
218 57.76 humidity 60.0 14400 > th dose independent rect. 12 8
220 57.77 humidity 60.0 14400 > th dose independent rect. 10 4
223 57.78 humidity 60.0 14400 < th dose independent sin 15 NA
230 57.79 humidity 60.0 14400 > th dose independent rect. 12 13
232 57.79 humidity 60.0 14400 > th dose independent rect. 12 16
269 57.82 humidity 70.0 14400 < th dose dependent rect. 12 1
272 57.83 humidity 60.0 14400 > th dose independent rect. 8 6
303 57.89 humidity 70.0 14400 < th dose dependent rect. 10 1
304 57.89 humidity 70.0 14400 < th dose dependent rect. 16 21
305 57.90 humidity 60.0 14400 > th dose independent rect. 8 12
316 57.92 humidity 60.0 14400 > th dose independent rect. 8 16
324 57.93 humidity 60.0 14400 > th dose independent sin 17 NA
327 57.93 humidity 60.0 14400 > th dose independent rect. 5 9
331 57.93 humidity 60.0 14400 > th dose independent rect. 1 13
367 57.97 humidity 60.0 14400 < th dose independent rect. 8 12
373 57.98 humidity 60.0 14400 > th dose independent rect. 3 17
374 57.98 humidity 60.0 14400 > th dose independent rect. 1 19
421 58.01 humidity 60.0 14400 > th dose independent no NA NA
474 58.02 radiation 1.0 90 > th dose independent rect. 16 15
482 58.03 humidity 60.0 14400 < th dose independent rect. 8 6
501 58.04 humidity 70.0 14400 < th dose dependent rect. 10 10
519 58.06 humidity 60.0 14400 < th dose independent no NA NA
569 58.06 humidity 70.0 14400 < th dose dependent rect. 12 8
571 58.06 radiation 40.0 4320 < th dose dependent rect. 19 11
586 58.07 humidity 70.0 14400 < th dose dependent rect. 12 23
698 58.15 atmosphere 1015.0 1440 < th dose independent rect. 17 2
708 58.16 wind 1.0 43200 < th dose independent rect. 4 6
718 58.17 humidity 70.0 14400 < th dose dependent rect. 12 21
721 58.18 radiation 1.0 90 > th dose independent sin 12 NA
792 58.20 humidity 70.0 14400 < th dose dependent no NA NA
851 58.23 humidity 70.0 14400 < th dose dependent rect. 10 3
855 58.24 precipitation 0.1 43200 < th dose independent rect. 17 2
858 58.24 precipitation 0.1 43200 < th dose dependent rect. 17 2
867 58.25 precipitation 0.1 43200 > th dose dependent rect. 15 7
896 58.29 precipitation 0.1 43200 > th dose dependent rect. 11 10
900 58.30 precipitation 0.1 43200 > th dose dependent rect. 14 5
902 58.31 precipitation 0.1 43200 < th dose independent rect. 15 6
907 58.31 radiation 40.0 14400 > th dose dependent rect. 12 1
908 58.31 precipitation 0.1 43200 < th dose dependent rect. 15 6
914 58.32 wind 1.0 43200 < th dose independent rect. 5 2
957 58.37 precipitation 0.1 43200 < th dose independent rect. 17 4
960 58.37 precipitation 0.1 43200 < th dose dependent rect. 17 4
976 58.39 precipitation 0.1 43200 < th dose independent rect. 15 3
977 58.39 temperature 30.0 4320 < th dose independent rect. 13 4
981 58.39 precipitation 0.1 43200 < th dose dependent rect. 15 3
994 58.41 temperature 30.0 4320 < th dose independent rect. 13 20