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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0587600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.39 (0.0206) R2 : 0.00841
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0854 (0.0434) R2dN8 : 0.0109 R2N8 : 0.00841
σ : 0.389
deviance : 69.31
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
63.01 0.373 3.27 1.18 0.226 -0.818 -0.325 5.86 -0.0444 6.53 29.23 1547 -- --
64.24 0.373 3.37 0.226 0.24 -0.194 -0.279 -- -0.0244 6.35 19.99 1448 -- --
63.24 0.37 3.27 1.16 0.22 -0.822 -- 5.88 -0.0367 6.8 29.16 1573 -- --
64.37 0.374 3.37 0.215 0.213 -0.257 -- -- -0.0248 5.99 19.04 957 -- --
65.42 0.377 3.28 1.17 -- -0.867 -- 6.11 0.0183 -- 28.7 1838 -- --
65.58 0.38 3.38 0.136 0.241 -- -0.311 -- -0.0759 6.68 -- -- -- --
65.82 0.38 3.38 0.131 0.239 -- -- -- -0.0748 6.92 -- -- -- --
65.64 0.377 3.37 0.231 -- -0.37 -- -- -0.0067 -- 19.01 590 -- --
65.42 0.377 3.38 -- 0.222 -0.178 -- -- -0.059 6.22 20.2 946 -- --
68.82 0.388 3.39 0.136 -- -- -- -- -0.0703 -- -- -- -- --
66.27 0.381 3.39 -- 0.241 -- -- -- -0.0894 6.89 -- -- -- --
66.93 0.381 3.38 -- -- -0.301 -- -- -0.0413 -- 19.8 577 -- --
69.31 0.389 3.39 -- -- -- -- -- -0.0854 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 55.58 humidity 80.0 10 < th dose independent rect. 4 4
3 55.68 humidity 80.0 10 < th dose independent rect. 2 6
5 55.70 humidity 80.0 10 < th dose independent rect. 24 8
11 56.44 radiation 10.0 30 > th dose independent rect. 7 1
38 58.88 temperature 25.0 30 > th dose independent rect. 7 1
57 60.12 humidity 90.0 30 < th dose dependent rect. 3 5
63 60.49 radiation 1.0 43200 < th dose dependent rect. 3 1
64 60.59 atmosphere 1005.0 90 > th dose dependent rect. 2 1
65 60.65 atmosphere 1005.0 10 > th dose dependent rect. 2 2
68 60.78 humidity 90.0 10 < th dose dependent rect. 7 1
71 60.83 atmosphere 1005.0 30 > th dose independent rect. 7 1
75 60.89 wind 5.0 14400 > th dose dependent rect. 9 1
78 60.93 wind 5.0 14400 < th dose independent rect. 9 3
83 61.02 atmosphere 995.0 30 > th dose independent rect. 3 23
88 61.06 wind 5.0 14400 > th dose independent rect. 9 3
94 61.09 wind 5.0 14400 > th dose independent rect. 23 18
96 61.10 wind 3.0 14400 > th dose dependent rect. 9 3
98 61.11 wind 5.0 14400 < th dose independent rect. 23 18
102 61.13 wind 7.0 14400 > th dose independent rect. 9 1
107 61.16 wind 7.0 14400 < th dose independent rect. 9 1
111 61.17 wind 7.0 14400 < th dose independent rect. 6 4
112 61.17 wind 5.0 14400 < th dose independent rect. 8 7
117 61.21 wind 7.0 14400 > th dose independent rect. 6 4
118 61.21 wind 5.0 14400 > th dose independent rect. 7 8
134 61.28 wind 5.0 14400 > th dose independent sin 3 NA
135 61.28 wind 5.0 14400 < th dose independent sin 2 NA
137 61.28 temperature 25.0 90 > th dose independent rect. 1 1
153 61.31 temperature 20.0 10 > th dose dependent rect. 7 1
156 61.32 wind 5.0 14400 > th dose independent rect. 4 12
162 61.33 wind 5.0 14400 < th dose independent rect. 4 12
165 61.33 wind 7.0 14400 < th dose dependent rect. 9 3
189 61.38 temperature 25.0 90 > th dose dependent rect. 1 2
249 61.48 temperature 10.0 30 > th dose dependent rect. 8 23
255 61.50 wind 9.0 1440 < th dose independent rect. 3 1
256 61.50 temperature 10.0 1440 > th dose independent rect. 3 1
259 61.50 temperature 30.0 1440 < th dose independent rect. 3 1
263 61.50 humidity 50.0 1440 > th dose independent rect. 3 1
272 61.50 atmosphere 995.0 1440 > th dose independent rect. 3 1
273 61.50 radiation 1.0 1440 < th dose independent rect. 3 1
297 61.50 temperature 10.0 1440 > th dose independent rect. 4 23
311 61.51 wind 1.0 30 < th dose dependent rect. 2 1
321 61.53 wind 1.0 30 < th dose independent rect. 2 1
325 61.53 atmosphere 995.0 720 > th dose independent rect. 23 16
330 61.53 wind 5.0 10 < th dose dependent rect. 7 1
332 61.53 atmosphere 1010.0 30 < th dose dependent rect. 2 1
334 61.53 wind 5.0 30 < th dose dependent rect. 2 6
335 61.54 temperature 15.0 10 > th dose independent rect. 3 23
345 61.55 humidity 90.0 30 > th dose independent rect. 2 1
350 61.56 atmosphere 1005.0 30 > th dose independent rect. 2 1
358 61.57 temperature 10.0 30 > th dose independent rect. 2 1
360 61.57 temperature 30.0 30 < th dose independent rect. 2 1
361 61.57 humidity 50.0 30 > th dose independent rect. 2 1
364 61.57 atmosphere 995.0 30 > th dose independent rect. 2 1
365 61.57 atmosphere 1010.0 30 < th dose independent rect. 2 1
367 61.57 radiation 1.0 30 < th dose independent rect. 2 1
372 61.57 precipitation 0.1 30 < th dose independent rect. 2 1
380 61.57 humidity 50.0 30 > th dose dependent rect. 2 1
386 61.57 radiation 1.0 30 < th dose dependent rect. 2 1
391 61.57 precipitation 0.1 30 < th dose dependent rect. 2 1
415 61.61 radiation 10.0 30 < th dose dependent rect. 3 23
437 61.64 temperature 30.0 30 < th dose dependent rect. 2 1
442 61.65 precipitation 0.1 30 < th dose independent rect. 3 23
445 61.65 precipitation 0.1 30 < th dose dependent rect. 3 23
446 61.66 atmosphere 1005.0 30 > th dose independent rect. 2 6
449 61.66 radiation 10.0 30 < th dose independent rect. 3 23
452 61.66 atmosphere 1000.0 30 > th dose dependent rect. 2 6
453 61.67 wind 3.0 30 < th dose independent rect. 7 1
459 61.68 wind 1.0 30 > th dose independent rect. 2 1
468 61.68 wind 5.0 14400 > th dose dependent rect. 21 19
504 61.70 wind 5.0 14400 > th dose independent rect. 8 21
521 61.72 wind 5.0 14400 < th dose independent rect. 8 21
567 61.77 humidity 90.0 270 < th dose dependent rect. 3 2
587 61.79 wind 5.0 14400 > th dose independent rect. 14 23
590 61.80 wind 5.0 14400 > th dose independent no NA NA
591 61.80 radiation 10.0 10 < th dose independent sin 11 NA
601 61.80 wind 5.0 14400 < th dose independent rect. 15 23
610 61.81 wind 5.0 14400 > th dose independent rect. 4 23
621 61.82 wind 5.0 14400 < th dose independent no NA NA
629 61.82 wind 5.0 14400 > th dose dependent sin 4 NA
648 61.84 wind 5.0 14400 > th dose independent rect. 2 23
649 61.84 wind 5.0 14400 < th dose independent rect. 4 23
651 61.84 wind 7.0 14400 > th dose dependent rect. 6 4
654 61.85 wind 9.0 720 < th dose independent rect. 15 8
665 61.85 atmosphere 995.0 30 > th dose independent rect. 8 23
675 61.86 wind 5.0 14400 < th dose independent rect. 2 23
682 61.87 wind 3.0 30 < th dose independent rect. 2 6
704 61.88 wind 9.0 10 < th dose independent rect. 3 23
735 61.90 radiation 1.0 10 > th dose dependent rect. 7 1
749 61.91 atmosphere 1005.0 10 > th dose dependent rect. 2 4
804 61.96 humidity 80.0 720 > th dose dependent rect. 3 1
822 61.98 temperature 10.0 720 > th dose independent rect. 15 8
827 61.98 temperature 10.0 720 > th dose independent rect. 23 16
868 62.01 temperature 10.0 30 > th dose dependent rect. 3 23
883 62.03 humidity 80.0 10 < th dose independent rect. 20 12
894 62.04 humidity 90.0 270 < th dose independent rect. 3 1
920 62.06 radiation 10.0 10 > th dose independent sin 11 NA