Os02g0582900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0582900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 288.72 | 0.798 | 3.51 | -1.49 | 0.52 | 37.2 | -1.05 | -119 | -0.417 | 5.02 | 0.1716 | 387 | 2.08 | 1.88 |
| 443.1 | 0.988 | 3.31 | -0.755 | 0.834 | 2.87 | -2.3 | -- | -0.572 | 5.53 | 0.1956 | 162 | 3.11 | 10 |
| 291.24 | 0.795 | 3.51 | -1.51 | 0.506 | 37.6 | -- | -121 | -0.407 | 4.61 | 0.1651 | 386 | 2.08 | 1.88 |
| 425.96 | 0.961 | 3.33 | -0.796 | 0.772 | 3.45 | -- | -- | -0.559 | 5.34 | 1.122e-07 | 316 | 2.75 | 10.4 |
| 304.43 | 0.813 | 3.5 | -1.49 | -- | 37.5 | -- | -119 | -0.413 | -- | 0.1656 | 387 | 2.07 | 1.87 |
| 451.39 | 0.996 | 3.31 | -0.732 | 0.861 | -- | -2.17 | -- | -0.579 | 5.51 | -- | -- | -- | -- |
| 462.82 | 1.01 | 3.31 | -0.741 | 0.848 | -- | -- | -- | -0.57 | 5.28 | -- | -- | -- | -- |
| 454.7 | 0.993 | 3.32 | -0.779 | -- | 4.34 | -- | -- | -0.508 | -- | -0.0008528 | 304 | 2.6 | 10.2 |
| 443.64 | 0.981 | 3.31 | -- | 0.778 | 3.65 | -- | -- | -0.483 | 5.08 | 0.0377 | 312 | 2.97 | 10.2 |
| 500.4 | 1.05 | 3.32 | -0.712 | -- | -- | -- | -- | -0.549 | -- | -- | -- | -- | -- |
| 477.3 | 1.02 | 3.29 | -- | 0.836 | -- | -- | -- | -0.488 | 5.32 | -- | -- | -- | -- |
| 471.6 | 1.01 | 3.29 | -- | -- | 4.02 | -- | -- | -0.423 | -- | -1.076e-06 | 312 | 2.87 | 10.2 |
| 513.77 | 1.06 | 3.3 | -- | -- | -- | -- | -- | -0.47 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 335.33 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 2 | 336.35 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 3 | 338.89 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 4 | 338.89 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 9 | 346.30 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 5 |
| 11 | 347.15 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 96 | 367.10 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 14 | 1 |
| 97 | 367.10 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 14 | 1 |
| 99 | 368.48 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 21 | 4 |
| 102 | 369.14 | wind | 1.0 | 720 | < th | dose independent | rect. | 23 | 1 |
| 105 | 369.93 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 10 | 5 |
| 106 | 370.11 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 107 | 370.16 | atmosphere | 1005.0 | 720 | > th | dose independent | rect. | 19 | 6 |
| 127 | 373.84 | precipitation | 0.1 | 270 | < th | dose independent | sin | 9 | NA |
| 128 | 373.84 | precipitation | 0.1 | 270 | < th | dose dependent | sin | 9 | NA |
| 129 | 373.85 | precipitation | 0.1 | 270 | > th | dose independent | sin | 9 | NA |
| 132 | 374.24 | wind | 1.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 144 | 375.50 | atmosphere | 1005.0 | 1440 | > th | dose independent | rect. | 22 | 1 |
| 166 | 377.06 | wind | 5.0 | 4320 | > th | dose independent | rect. | 18 | 10 |
| 167 | 377.29 | wind | 5.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 172 | 377.44 | wind | 5.0 | 4320 | < th | dose independent | rect. | 18 | 10 |
| 183 | 378.02 | wind | 5.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 218 | 379.34 | precipitation | 0.1 | 270 | > th | dose dependent | sin | 8 | NA |
| 260 | 380.73 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 18 | 10 |
| 295 | 381.49 | atmosphere | 1010.0 | 270 | < th | dose dependent | rect. | 22 | 11 |
| 373 | 383.45 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 18 | 4 |
| 379 | 383.72 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 5 | 1 |
| 380 | 383.72 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 5 | 1 |
| 391 | 383.96 | atmosphere | 1010.0 | 720 | < th | dose dependent | rect. | 20 | 7 |
| 394 | 384.05 | wind | 7.0 | 4320 | < th | dose independent | rect. | 18 | 2 |
| 475 | 385.20 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 18 | 2 |
| 487 | 385.40 | atmosphere | 1010.0 | 720 | < th | dose dependent | rect. | 21 | 5 |
| 531 | 386.15 | atmosphere | 1005.0 | 10 | < th | dose dependent | sin | 7 | NA |
| 553 | 386.50 | atmosphere | 1010.0 | 270 | < th | dose dependent | sin | 9 | NA |
| 572 | 386.93 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 21 | 10 |
| 580 | 387.21 | wind | 5.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 586 | 387.33 | wind | 5.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 594 | 387.44 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 21 | 2 |
| 607 | 387.73 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 626 | 387.89 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 21 | 4 |
| 647 | 388.26 | atmosphere | 1005.0 | 720 | > th | dose independent | sin | 14 | NA |
| 667 | 388.57 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 20 | 15 |
| 699 | 389.24 | wind | 7.0 | 4320 | > th | dose independent | sin | 12 | NA |
| 711 | 389.54 | wind | 7.0 | 4320 | < th | dose independent | sin | 13 | NA |
| 714 | 389.63 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 744 | 390.17 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 14 |
| 751 | 390.23 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 24 | 10 |
| 780 | 390.62 | wind | 1.0 | 720 | < th | dose dependent | rect. | 23 | 1 |
| 807 | 390.97 | wind | 5.0 | 4320 | > th | dose dependent | sin | 12 | NA |
| 822 | 391.12 | atmosphere | 1005.0 | 720 | < th | dose independent | sin | 14 | NA |
| 982 | 393.26 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 14 |
| 993 | 393.37 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 21 | 10 |