Os02g0582100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0582100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47.78 | 0.325 | 11.8 | 1.13 | 0.442 | 0.578 | 1.35 | 0.805 | 1.01 | 20.1 | 70.52 | 4415 | -- | -- |
| 48.68 | 0.325 | 11.8 | 1.14 | 0.449 | 0.597 | 1.35 | -- | 1.02 | 20.1 | 70.72 | 4414 | -- | -- |
| 53.32 | 0.34 | 11.8 | 1.12 | 0.443 | 0.575 | -- | 0.824 | 1.01 | 20 | 70.05 | 4414 | -- | -- |
| 54.19 | 0.343 | 11.8 | 1.15 | 0.447 | 0.634 | -- | -- | 1.04 | 19.9 | 70.43 | 4437 | -- | -- |
| 63.93 | 0.372 | 11.8 | 1.09 | -- | 0.574 | -- | 0.788 | 1 | -- | 70.01 | 4398 | -- | -- |
| 54.87 | 0.347 | 11.8 | 1.18 | 0.445 | -- | 1.34 | -- | 0.948 | 20.1 | -- | -- | -- | -- |
| 60.29 | 0.364 | 11.8 | 1.14 | 0.445 | -- | -- | -- | 0.949 | 20 | -- | -- | -- | -- |
| 64.74 | 0.375 | 11.8 | 1.13 | -- | 0.63 | -- | -- | 1 | -- | 69.55 | 4364 | -- | -- |
| 58.86 | 0.357 | 11.8 | -- | 0.367 | 1.02 | -- | -- | 0.985 | 20 | 60.52 | 29747 | -- | -- |
| 71.12 | 0.394 | 11.8 | 1.13 | -- | -- | -- | -- | 0.944 | -- | -- | -- | -- | -- |
| 94.41 | 0.455 | 11.9 | -- | 0.438 | -- | -- | -- | 0.823 | 20.2 | -- | -- | -- | -- |
| 65.65 | 0.377 | 11.9 | -- | -- | 1.15 | -- | -- | 0.814 | -- | 63 | 30172 | -- | -- |
| 105.02 | 0.478 | 11.9 | -- | -- | -- | -- | -- | 0.818 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 40.79 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 2 | 41.40 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 3 | 41.74 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 5 | 42.33 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 5 |
| 12 | 43.15 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 17 | 43.46 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 20 | 43.69 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 21 | 43.74 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 23 | 43.97 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 11 | 2 |
| 26 | 44.02 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 40 | 44.39 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 12 |
| 43 | 44.43 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 65 | 44.81 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 11 |
| 106 | 45.05 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 134 | 45.18 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 139 | 45.20 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 141 | 45.20 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 155 | 45.25 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 156 | 45.25 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 3 | NA |
| 160 | 45.26 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 12 |
| 162 | 45.26 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 12 |
| 198 | 45.40 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 199 | 45.40 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 11 |
| 200 | 45.40 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 201 | 45.40 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 217 | 45.45 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 236 | 45.51 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 245 | 45.55 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 248 | 45.55 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 278 | 45.62 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 279 | 45.62 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 294 | 45.65 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 417 | 45.80 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 10 | 23 |
| 434 | 45.82 | temperature | 25.0 | 14400 | > th | dose dependent | no | NA | NA |
| 435 | 45.82 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 7 |
| 443 | 45.83 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 4 |
| 464 | 45.88 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 12 | 4 |
| 466 | 45.88 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 12 | 4 |
| 495 | 45.97 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 9 |
| 497 | 45.98 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 512 | 46.04 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 514 | 46.04 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 24 | 16 |
| 520 | 46.05 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 7 |
| 522 | 46.05 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 7 |
| 525 | 46.06 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 531 | 46.07 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 2 |
| 535 | 46.09 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 24 | 17 |
| 536 | 46.09 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 24 | 17 |
| 541 | 46.09 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 24 | 17 |
| 542 | 46.10 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 548 | 46.11 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 559 | 46.15 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 560 | 46.15 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 564 | 46.15 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 568 | 46.16 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 1 | 10 |
| 572 | 46.18 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 5 | 6 |
| 574 | 46.19 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 584 | 46.21 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 3 | 8 |
| 592 | 46.22 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 3 |
| 627 | 46.27 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 635 | 46.27 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 636 | 46.27 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 653 | 46.29 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 657 | 46.29 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 661 | 46.30 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 685 | 46.34 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 5 | 11 |
| 688 | 46.34 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 1 | 15 |
| 689 | 46.34 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 21 | 19 |
| 724 | 46.39 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 730 | 46.39 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 4 |
| 731 | 46.40 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 4 |
| 759 | 46.44 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 12 | 4 |
| 855 | 46.53 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 11 | 1 |
| 857 | 46.54 | temperature | 25.0 | 14400 | > th | dose independent | sin | 6 | NA |