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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0581800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.02 (0.0284) R2 : 0.307
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.24 (0.0979) R2dE : 0.26 R2E : 0.284
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.197 (0.061) R2dN8 : 0.0226 R2N8 : 0.0472
σ : 0.53
deviance : 129.65
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_____
C
peak time of C : --
E
wheather : atmosphere
threshold : 1006
memory length : 21
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 13.9
open length of G : 4.98

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
97.2 0.463 3 0.7 0.411 1.16 1.04 2.34 0.35 20.1 1005 8 14 4.02
104.75 0.477 3 0.722 0.433 1.06 1.55 -- 0.355 19.5 1005 8 14 4.04
100.12 0.466 3 0.688 0.412 1.14 -- 2.69 0.364 19.7 1005 9 14 4.04
112.01 0.493 3 0.674 0.423 1.05 -- -- 0.348 19.7 1005 11 14 4.17
108.83 0.486 2.99 0.658 -- 1.25 -- 2.58 0.341 -- 1005 14 13.9 4.18
131.85 0.538 2.98 0.72 0.69 -- 1.58 -- 0.461 18.7 -- -- -- --
138.01 0.55 2.98 0.696 0.7 -- -- -- 0.467 18.4 -- -- -- --
118.78 0.508 3 0.69 -- 1.15 -- -- 0.314 -- 1005 24 13.8 4.95
124.09 0.519 3 -- 0.419 1.02 -- -- 0.291 19.7 1005 11 14 4.26
163.46 0.597 2.96 0.678 -- -- -- -- 0.452 -- -- -- -- --
150.79 0.574 2.99 -- 0.691 -- -- -- 0.389 18.5 -- -- -- --
129.65 0.53 3.02 -- -- 1.24 -- -- 0.197 -- 1006 21 13.9 4.98
175.6 0.619 2.98 -- -- -- -- -- 0.377 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 98.81 atmosphere 1005 10 > th dose independent rect. 14 4
2 98.98 atmosphere 1005 90 > th dose independent rect. 13 5
6 102.95 atmosphere 1005 90 > th dose dependent rect. 13 5
9 103.45 humidity 60 270 > th dose independent rect. 13 2
12 104.24 temperature 30 90 < th dose independent rect. 13 5
13 104.31 atmosphere 1005 10 > th dose dependent rect. 14 4
23 105.86 temperature 30 270 < th dose independent rect. 13 2
25 105.97 atmosphere 1005 270 > th dose dependent rect. 13 2
37 106.76 temperature 30 270 < th dose independent rect. 11 6
39 107.01 humidity 50 90 > th dose dependent rect. 13 4
44 107.28 humidity 50 10 > th dose dependent rect. 13 5
59 108.10 humidity 50 270 > th dose dependent rect. 13 1
70 108.61 humidity 60 10 > th dose independent rect. 13 5
109 110.23 temperature 30 270 < th dose independent rect. 11 20
129 110.88 temperature 30 270 < th dose independent rect. 12 17
200 112.64 humidity 60 270 > th dose independent rect. 11 20
205 112.72 humidity 60 270 > th dose independent rect. 12 17
221 113.04 humidity 50 10 > th dose dependent rect. 13 21
251 113.53 radiation 20 90 < th dose dependent rect. 12 5
264 113.74 radiation 10 90 < th dose independent rect. 12 5
270 113.81 temperature 30 720 < th dose independent rect. 20 20
287 113.99 humidity 90 10 < th dose independent rect. 17 21
295 114.06 temperature 30 720 < th dose independent rect. 5 11
300 114.08 radiation 20 10 < th dose dependent rect. 13 4
334 114.47 temperature 30 10 < th dose dependent rect. 12 6
363 114.71 humidity 60 10 > th dose dependent rect. 20 23
398 114.92 humidity 50 10 > th dose dependent rect. 13 19
423 115.09 humidity 50 10 > th dose dependent rect. 13 17
434 115.19 temperature 10 10 > th dose dependent rect. 15 23
438 115.22 temperature 10 10 > th dose dependent rect. 17 21
449 115.32 radiation 40 270 < th dose independent rect. 13 2
485 115.50 humidity 90 30 < th dose dependent rect. 17 21
509 115.68 humidity 60 10 > th dose dependent rect. 14 1
550 115.91 temperature 10 270 > th dose dependent rect. 15 21
570 116.00 temperature 30 720 > th dose independent rect. 9 6
606 116.04 humidity 80 270 > th dose independent rect. 13 1
613 116.06 radiation 40 10 < th dose dependent rect. 14 1
620 116.09 temperature 30 720 < th dose independent sin 4 NA
633 116.14 radiation 20 10 < th dose independent rect. 13 4
659 116.24 temperature 30 720 < th dose independent rect. 4 20
680 116.27 temperature 30 720 > th dose independent sin 4 NA
708 116.39 temperature 30 720 > th dose dependent rect. 8 7
723 116.40 temperature 30 30 < th dose independent rect. 2 16
760 116.48 temperature 30 720 > th dose dependent rect. 11 2
767 116.49 temperature 25 10 > th dose dependent rect. 15 23
768 116.50 temperature 30 720 > th dose dependent sin 6 NA
846 116.69 humidity 90 10 < th dose dependent rect. 15 23
888 116.80 humidity 60 10 > th dose dependent rect. 23 19
895 116.83 temperature 30 720 < th dose independent sin 23 NA
939 116.92 temperature 10 270 > th dose dependent rect. 7 15
994 117.06 radiation 40 720 > th dose dependent rect. 12 23